Detailed information NTG0975064

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: ACK2OW_RS17475
• Genome accession: NZ_CP180575
• Coordinates: 3344806..3345933 (+)
• Length: 375 a.a.
• NCBI ID: WP_151870524.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain K3C
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3339806..3350933

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACK2OW_RS17450 (ACK2OW_17450)	-	3340495..3341415 (-)	921	WP_249851206.1	DUF5655 domain-containing protein	-
ACK2OW_RS17455 (ACK2OW_17455)	-	3341428..3341766 (-)	339	WP_021481280.1	hypothetical protein	-
ACK2OW_RS17460 (ACK2OW_17460)	-	3341933..3343819 (+)	1887	WP_125121420.1	ribonuclease YeeF family protein	-
ACK2OW_RS17465 (ACK2OW_17465)	-	3343832..3344227 (+)	396	WP_042978001.1	immunity 22 family protein	-
ACK2OW_RS17470 (ACK2OW_17470)	-	3344312..3344615 (+)	304	Protein_3463	hypothetical protein	-
ACK2OW_RS17475 (ACK2OW_17475)	rapC	3344806..3345933 (+)	1128	WP_151870524.1	Rap family tetratricopeptide repeat protein	Regulator
ACK2OW_RS17480 (ACK2OW_17480)	-	3345923..3346120 (+)	198	WP_072175460.1	hypothetical protein	-
ACK2OW_RS17485 (ACK2OW_17485)	-	3346200..3346715 (-)	516	WP_095432147.1	HEPN domain-containing protein	-
ACK2OW_RS17490 (ACK2OW_17490)	-	3346728..3347906 (-)	1179	WP_151870355.1	GmrSD restriction endonuclease domain-containing protein	-
ACK2OW_RS17495 (ACK2OW_17495)	-	3347940..3349022 (-)	1083	WP_214289102.1	restriction endonuclease	-
ACK2OW_RS17500 (ACK2OW_17500)	-	3349027..3350145 (-)	1119	WP_095432145.1	DNA cytosine methyltransferase	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 44381.08 Da
• Isoelectric Point: 6.8169

>NTDB_id=975064 ACK2OW_RS17475 WP_151870524.1 3344806..3345933(+) (rapC) [Bacillus subtilis strain K3C]
MGTISSPHVGIKINEWNRHIQKFNVTDAEMLKAEIERDIDIMEEDQDLLIYYQLIAFRHQLMIDYVIPSEGNQMELSEYL
KRIEGSNRKMEKLVEYYYYFFQGMYEFKEGNFLSAITFYQKAENTIPYISDEIERAEFYFKMAEVFYHMKQTHVSMHYSS
QAYNIYKTHDLYSVRRIQCHFVIAGNYDDLESHEKALPHLEQALKGARLLESKNKRIYGQALFNIGNCYLKMGELTKAAK
YMEKSILQFKKSNFNNLTQAYHDLALIYFLQHKQDQAMDCFRKGVRFACKFDDNLFKIMFEGLQALFIKKGEASILLNVF
NKLETSQGYPYMEELALLAAKFYTEIGQMDDSVICFKKMVHARKQIQRGDCLYEI

Nucleotide

• Length: 1128 bp

>NTDB_id=975064 ACK2OW_RS17475 WP_151870524.1 3344806..3345933(+) (rapC) [Bacillus subtilis strain K3C]
TTGGGCACGATTTCGTCTCCGCACGTTGGGATAAAAATTAATGAATGGAACCGGCATATTCAAAAGTTTAATGTGACAGA
TGCTGAAATGCTTAAAGCTGAGATCGAACGAGACATTGACATCATGGAAGAAGACCAAGACCTCTTGATTTACTATCAGC
TCATTGCATTTCGCCATCAGCTTATGATTGACTATGTGATTCCATCTGAAGGAAACCAAATGGAGTTATCAGAATATTTA
AAGAGAATTGAAGGCAGCAACAGGAAGATGGAGAAACTCGTTGAATACTACTATTACTTTTTTCAAGGGATGTATGAATT
CAAAGAGGGCAATTTCTTAAGTGCCATTACATTCTATCAAAAAGCGGAAAACACCATTCCCTATATTTCAGATGAAATTG
AGCGGGCGGAATTTTATTTTAAAATGGCTGAAGTGTTTTATCATATGAAACAAACCCACGTATCCATGCACTATTCTTCT
CAGGCGTATAACATCTATAAAACACACGACCTTTACTCAGTCCGCCGCATACAATGCCATTTTGTGATCGCAGGAAACTA
CGACGATTTAGAAAGTCATGAAAAGGCGCTCCCTCACCTTGAACAGGCACTAAAAGGCGCACGGCTTCTTGAAAGCAAAA
ACAAGCGGATTTACGGCCAAGCTTTATTCAATATCGGAAATTGTTATCTTAAAATGGGCGAATTGACGAAAGCAGCAAAA
TACATGGAGAAATCGATTCTCCAATTCAAAAAATCAAATTTCAACAACTTGACACAAGCTTACCACGATTTAGCCTTAAT
TTATTTTCTTCAACATAAACAAGACCAGGCAATGGATTGTTTCAGAAAAGGCGTACGCTTCGCATGTAAATTCGACGATA
ATCTATTTAAAATTATGTTTGAAGGATTGCAGGCGCTGTTTATCAAAAAAGGAGAAGCGTCCATTTTATTAAATGTTTTC
AACAAATTAGAGACATCCCAAGGATATCCTTATATGGAAGAGTTGGCATTATTAGCCGCAAAGTTTTATACTGAAATTGG
GCAGATGGATGATTCTGTTATCTGTTTCAAAAAGATGGTTCATGCCCGCAAACAAATTCAGAGAGGGGATTGTTTGTATG
AAATTTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (221-287)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (3-64)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	41.953	100	0.424
rapF	Bacillus subtilis subsp. subtilis str. 168	39.05	100	0.395