Detailed information    

insolico Bioinformatically predicted

Overview

Name   rapC   Type   Regulator
Locus tag   ACK2OW_RS17435 Genome accession   NZ_CP180575
Coordinates   3336838..3337968 (-) Length   376 a.a.
NCBI ID   WP_153257316.1    Uniprot ID   -
Organism   Bacillus subtilis strain K3C     
Function   inhibit the DNA-binding function of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3331838..3342968
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK2OW_RS17390 (ACK2OW_17390) cotJC 3331942..3332511 (-) 570 WP_003233850.1 spore coat protein CotJC -
  ACK2OW_RS17395 (ACK2OW_17395) cotJB 3332526..3332789 (-) 264 WP_003219491.1 spore coat protein CotJB -
  ACK2OW_RS17400 (ACK2OW_17400) cotJA 3332773..3333021 (-) 249 WP_003219489.1 spore coat-associated protein CotJA -
  ACK2OW_RS17405 (ACK2OW_17405) yesF 3333148..3334016 (-) 869 Protein_3450 NmrA family NAD(P)-binding protein -
  ACK2OW_RS17410 (ACK2OW_17410) yesE 3334013..3334456 (-) 444 WP_015715468.1 nuclear transport factor 2 family protein -
  ACK2OW_RS17415 (ACK2OW_17415) yezE 3334536..3335120 (-) 585 WP_416042377.1 TetR/AcrR family transcriptional regulator -
  ACK2OW_RS17420 (ACK2OW_17420) - 3335234..3335662 (-) 429 WP_032726703.1 hypothetical protein -
  ACK2OW_RS17425 (ACK2OW_17425) yeeI 3335796..3336515 (-) 720 WP_003233863.1 YebC/PmpR family DNA-binding transcriptional regulator -
  ACK2OW_RS17430 (ACK2OW_17430) phrH 3336675..3336848 (-) 174 WP_032726704.1 phosphatase RapH inhibitor PhrH -
  ACK2OW_RS17435 (ACK2OW_17435) rapC 3336838..3337968 (-) 1131 WP_153257316.1 response regulator aspartate phosphatase RapH Regulator
  ACK2OW_RS17440 (ACK2OW_17440) - 3338114..3339274 (-) 1161 WP_101501736.1 lysozyme inhibitor LprI family protein -
  ACK2OW_RS17445 (ACK2OW_17445) - 3339382..3340344 (-) 963 WP_214285692.1 hypothetical protein -
  ACK2OW_RS17450 (ACK2OW_17450) - 3340495..3341415 (-) 921 WP_249851206.1 DUF5655 domain-containing protein -
  ACK2OW_RS17455 (ACK2OW_17455) - 3341428..3341766 (-) 339 WP_021481280.1 hypothetical protein -

Sequence

Protein


Download         Length: 376 a.a.        Molecular weight: 43979.24 Da        Isoelectric Point: 5.8846

>NTDB_id=975063 ACK2OW_RS17435 WP_153257316.1 3336838..3337968(-) (rapC) [Bacillus subtilis strain K3C]
MSQAIPSSRVGVKINEWYKMIRQFSVPDAEILKAEVEQDIQQMEEDQDLLIYYSLMCFRHQLMLDYLEPGQPYGNRPTVT
ELLETIETPQKKLTGLLKYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDEIEKAEFHFKVAEAYYHMKQTHVSMH
HILQALDIYQNNPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLETALKLATDIQNDRFIAISLLNIANSYDRSGDDQMAV
EHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETVDERKIHDL
LSYFEKKNLHAYIEACSRSAAAVFESSCHFEQAAAFYRKVLKAQEDILKGECLYAY

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=975063 ACK2OW_RS17435 WP_153257316.1 3336838..3337968(-) (rapC) [Bacillus subtilis strain K3C]
TTGAGTCAAGCCATACCGTCTTCGCGTGTTGGTGTTAAGATTAATGAATGGTATAAAATGATTCGCCAGTTCAGTGTTCC
GGATGCTGAGATTCTGAAAGCGGAGGTGGAGCAGGACATTCAGCAGATGGAAGAAGACCAGGATTTACTGATCTATTATT
CTCTGATGTGTTTTCGGCACCAGCTGATGCTGGATTATTTGGAGCCGGGACAGCCTTACGGGAATCGCCCTACAGTGACA
GAACTTTTGGAAACAATTGAGACCCCTCAGAAAAAACTCACAGGCCTTTTGAAATACTACTCTTTGTTTTTCCGCGGCAT
GTATGAATTTGATCAAAAAGAATATGTGGAAGCGATCGGGTATTATCGCGAGGCGGAGAAAGAACTGCCGTTTGTGTCAG
ATGAAATTGAGAAAGCCGAATTCCATTTTAAAGTGGCCGAAGCGTATTATCACATGAAGCAAACCCATGTGTCGATGCAT
CATATTCTTCAAGCCTTAGACATTTATCAAAACAATCCCCTATACAGCATTAGAACGATACAAAGCTTGTTTGTGATCGC
CGGCAATTATGATGATTTCAAACATTATGATAAAGCGCTCCCGCATTTAGAGACGGCGCTCAAATTGGCAACGGACATTC
AAAACGATCGGTTTATCGCCATTTCTCTATTGAACATTGCAAACAGCTATGACAGATCAGGAGACGATCAGATGGCTGTA
GAACATTTCCAAAAAGCGGCGAAAGTAAGCAGAGAGAAAGTCCCTGATCTGCTTCCGAAAGTCTTGTTTGGGTTAAGCTG
GACATTATGTAAAGCGGGCCAAACACAGAAGGCGTTTCAGTTCATAGAGGAAGGATTAGACCATATCACAGCACGTTCTC
ACAAATTTTATAAAGAATTGTTTCTGTTCTTGCAGGCCGTGTACAAGGAGACTGTTGATGAACGCAAAATTCATGATCTT
TTAAGCTATTTCGAAAAAAAGAACCTGCACGCGTACATTGAAGCATGTTCCCGGAGTGCTGCCGCTGTTTTTGAAAGCAG
CTGTCACTTTGAACAAGCCGCTGCGTTTTATCGGAAAGTGCTGAAAGCCCAAGAAGATATTCTAAAAGGAGAGTGTTTAT
ATGCCTATTAA

Domains

Predicted by InterProScan.

response regulator aspartate phosphatase H, N terminal (RapH_N)

(5-65)

Tetratricopeptide repeat (TPR_7)

(222-251)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rapC Bacillus subtilis subsp. subtilis str. 168

40.426

100

0.404
  rapF Bacillus subtilis subsp. subtilis str. 168

39.523

100

0.396