Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ACK2OW_RS08375 Genome accession   NZ_CP180575
Coordinates   1537298..1538011 (-) Length   237 a.a.
NCBI ID   WP_003228163.1    Uniprot ID   -
Organism   Bacillus subtilis strain K3C     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1532298..1543011
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK2OW_RS08355 (ACK2OW_08355) ghrB 1532443..1533420 (+) 978 WP_120027527.1 2-hydroxyacid dehydrogenase -
  ACK2OW_RS08360 (ACK2OW_08360) psdB 1533457..1535397 (-) 1941 WP_064671550.1 lantibiotic ABC transporter permease PsdB -
  ACK2OW_RS08365 (ACK2OW_08365) psdA 1535372..1536151 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  ACK2OW_RS08370 (ACK2OW_08370) psdS 1536234..1537304 (-) 1071 WP_064671548.1 two-component sensor histidine kinase PsdS -
  ACK2OW_RS08375 (ACK2OW_08375) braR 1537298..1538011 (-) 714 WP_003228163.1 two-component system response regulator PsdR Regulator
  ACK2OW_RS08380 (ACK2OW_08380) - 1538158..1538367 (+) 210 WP_021480676.1 hypothetical protein -
  ACK2OW_RS08385 (ACK2OW_08385) yvcN 1538403..1539167 (-) 765 WP_080286260.1 arylamine N-acetyltransferase family protein -
  ACK2OW_RS08390 (ACK2OW_08390) crh 1539168..1539425 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  ACK2OW_RS08395 (ACK2OW_08395) whiA 1539449..1540399 (-) 951 WP_003228147.1 DNA-binding protein WhiA -
  ACK2OW_RS08400 (ACK2OW_08400) mgfK 1540422..1541375 (-) 954 WP_049140423.1 gluconeogenesis morphogenetic factor -
  ACK2OW_RS08405 (ACK2OW_08405) rapZ 1541377..1542264 (-) 888 WP_003228143.1 RNase adapter RapZ -
  ACK2OW_RS08410 (ACK2OW_08410) rppI 1542289..1542765 (-) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27541.46 Da        Isoelectric Point: 4.6774

>NTDB_id=974992 ACK2OW_RS08375 WP_003228163.1 1537298..1538011(-) (braR) [Bacillus subtilis strain K3C]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLKDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=974992 ACK2OW_RS08375 WP_003228163.1 1537298..1538011(-) (braR) [Bacillus subtilis strain K3C]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATACTCGCCCTCTTTGCCGCAGGAATCAAGAATAG
TGGAGCTTGGCGGGCTAACGATTTATCCTGATCAAAATGAAGCGGAGTGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCTGGACTGA
AAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43

Multiple sequence alignment