Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ACK2OW_RS06050 Genome accession   NZ_CP180575
Coordinates   1078788..1079483 (-) Length   231 a.a.
NCBI ID   WP_172861264.1    Uniprot ID   -
Organism   Bacillus subtilis strain K3C     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1073788..1084483
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK2OW_RS06030 (ACK2OW_06030) yttA 1074215..1074961 (+) 747 WP_101502233.1 LMBR1 domain-containing protein -
  ACK2OW_RS06035 (ACK2OW_06035) bceB 1074998..1076938 (-) 1941 WP_046160751.1 bacitracin ABC transporter permease BceB -
  ACK2OW_RS06040 (ACK2OW_06040) bceA 1076928..1077689 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  ACK2OW_RS06045 (ACK2OW_06045) bceS 1077791..1078795 (-) 1005 WP_416042590.1 two-component sensor histidine kinase BceS -
  ACK2OW_RS06050 (ACK2OW_06050) braR 1078788..1079483 (-) 696 WP_172861264.1 two-component response regulator BceR Regulator
  ACK2OW_RS06055 (ACK2OW_06055) ytrF 1079580..1080890 (-) 1311 WP_015251399.1 ABC transporter permease YtrF -
  ACK2OW_RS06060 (ACK2OW_06060) ytrE 1080880..1081575 (-) 696 WP_003229129.1 ABC transporter ATP-binding protein YtrE -
  ACK2OW_RS06065 (ACK2OW_06065) ytrD 1081590..1082567 (-) 978 WP_172861259.1 ABC transporter permease YtrD -
  ACK2OW_RS06070 (ACK2OW_06070) - 1082599..1083585 (-) 987 WP_085187229.1 ABC transporter permease subunit -
  ACK2OW_RS06075 (ACK2OW_06075) ytrB 1083579..1084457 (-) 879 WP_014665071.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26928.86 Da        Isoelectric Point: 6.2377

>NTDB_id=974981 ACK2OW_RS06050 WP_172861264.1 1078788..1079483(-) (braR) [Bacillus subtilis strain K3C]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQNFSQVLQEFSAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREKLIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKFGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=974981 ACK2OW_RS06050 WP_172861264.1 1078788..1079483(-) (braR) [Bacillus subtilis strain K3C]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGAATTTCAGTCAGGTGCTGCAGGAATTTTCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTTCCTAAATTTGACGGTTTTCATTGGTGCCGGCTGATCCGTTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
AGGGACCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATTGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAGATGTTCATT
CTTAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGTGAAAAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGCGCATATATCG
AGACGAAGTTCGGCCAAGGCTATATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(5-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377