Detailed information NTG0974964

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: ACK2OW_RS03935
• Genome accession: NZ_CP180575
• Coordinates: 669819..670946 (-)
• Length: 375 a.a.
• NCBI ID: WP_077671578.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain K3C
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 664819..675946

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACK2OW_RS03910 (ACK2OW_03910)	-	664839..665036 (-)	198	Protein_777	recombinase family protein	-
ACK2OW_RS03915 (ACK2OW_03915)	-	664994..665172 (-)	179	Protein_778	hypothetical protein	-
ACK2OW_RS03920 (ACK2OW_03920)	fumC	665297..666685 (-)	1389	WP_032725151.1	class II fumarate hydratase	-
ACK2OW_RS03925 (ACK2OW_03925)	-	666852..667742 (+)	891	WP_077671576.1	LysR family transcriptional regulator	-
ACK2OW_RS03930 (ACK2OW_03930)	-	668684..669079 (+)	396	WP_046160622.1	VOC family protein	-
ACK2OW_RS03935 (ACK2OW_03935)	rapC	669819..670946 (-)	1128	WP_077671578.1	Rap family tetratricopeptide repeat protein	Regulator
ACK2OW_RS03940 (ACK2OW_03940)	phrE	671356..671490 (+)	135	WP_032725165.1	phosphatase RapE inhibitor PhrE	-
ACK2OW_RS03945 (ACK2OW_03945)	-	671625..672476 (-)	852	WP_032725166.1	aldo/keto reductase	-
ACK2OW_RS03950 (ACK2OW_03950)	-	672646..673089 (+)	444	WP_029318107.1	MerR family transcriptional regulator	-
ACK2OW_RS03955 (ACK2OW_03955)	-	673287..673436 (-)	150	WP_234398249.1	helix-turn-helix domain-containing protein	-
ACK2OW_RS03960 (ACK2OW_03960)	-	674018..675943 (+)	1926	WP_416042549.1	ribonuclease YeeF family protein	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 44173.38 Da
• Isoelectric Point: 5.9899

>NTDB_id=974964 ACK2OW_RS03935 WP_077671578.1 669819..670946(-) (rapC) [Bacillus subtilis strain K3C]
MNPVLSSSEVGVKINEWYKMIRQFSVPDAEILKAEVEHEIQRMEEDEYLLIYFSLMKFRHQLMLDYLEPVTTRIRPTIEE
LLEKIETSNKGISGLLSYYSLFFRGMYEFDKKQYMKAIYYYREAEKQLIHVPDEIERAEFHFKLAEAYYGMKQSHVSMHH
VKQALDIYNQYELYKVRKVQCMFVISGNYTDFKHYEKSQPHLEKALELSRELNNKRLISSALYNLGTNFADSGDYEQAEV
YIKQAVEITEKEKLTNLPHSLFSYAKILFKQGKMNEAIQVSKKGLSAALYQGDELFAKLQGYLKALYVDAVDQQGVNKTI
EYLEKNKNYSYIEDIACETAAAYANSKEFETSYVYHQKMLETQTQIQRGECLYDF

Nucleotide

• Length: 1128 bp

>NTDB_id=974964 ACK2OW_RS03935 WP_077671578.1 669819..670946(-) (rapC) [Bacillus subtilis strain K3C]
GTGAATCCGGTTTTAAGTTCGTCAGAAGTTGGCGTAAAGATCAATGAATGGTATAAAATGATACGTCAATTTAGTGTCCC
GGATGCAGAGATTTTAAAGGCAGAGGTGGAGCACGAAATCCAACGGATGGAGGAAGATGAGTATTTACTCATTTACTTCT
CCCTAATGAAATTCCGTCATCAGCTCATGTTAGATTATTTGGAACCCGTAACAACACGTATAAGACCAACTATTGAGGAA
CTTCTTGAAAAAATTGAGACTTCAAATAAAGGCATATCTGGCCTGTTGTCGTATTATTCTCTGTTTTTCAGAGGGATGTA
CGAGTTTGATAAGAAGCAATACATGAAAGCTATTTACTATTATAGAGAAGCTGAAAAGCAGCTTATACATGTCCCTGATG
AGATTGAAAGAGCAGAGTTTCATTTTAAGTTAGCTGAAGCATATTATGGTATGAAGCAAAGTCATGTGTCTATGCATCAC
GTTAAACAAGCGTTAGATATCTATAATCAATATGAACTTTATAAGGTGCGGAAAGTTCAGTGTATGTTTGTTATTTCAGG
GAATTATACTGATTTTAAACATTACGAAAAAAGTCAGCCGCATCTTGAAAAGGCATTAGAGTTATCTAGGGAATTGAATA
ACAAAAGGTTGATCAGTTCTGCACTATATAATTTAGGCACTAATTTTGCTGACAGCGGTGATTACGAGCAGGCGGAAGTA
TACATAAAGCAAGCAGTGGAGATTACAGAAAAAGAAAAGCTCACAAACTTGCCACATTCTTTATTTTCTTATGCTAAAAT
CCTTTTTAAACAAGGAAAAATGAATGAGGCTATCCAAGTAAGTAAGAAAGGTTTGTCAGCAGCTCTTTATCAAGGTGATG
AGCTTTTCGCAAAATTACAGGGATATTTAAAAGCTCTTTATGTCGATGCAGTGGACCAACAAGGTGTTAATAAAACAATA
GAATACCTAGAAAAAAATAAGAACTATTCATATATTGAAGACATTGCCTGTGAGACCGCAGCTGCTTACGCAAACTCAAA
AGAATTTGAAACATCCTATGTATATCATCAGAAAATGCTTGAGACTCAAACACAAATTCAAAGGGGAGAATGCCTGTATG
ACTTTTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (195-251)

• Tetratricopeptide repeat (TPR_8) (259-287)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	44.149	100	0.443
rapF	Bacillus subtilis subsp. subtilis str. 168	39.418	100	0.397