Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ACMX8W_RS21810 Genome accession   NZ_CP180439
Coordinates   4181247..4182041 (-) Length   264 a.a.
NCBI ID   WP_015483958.1    Uniprot ID   -
Organism   Bacillus subtilis strain Z-294     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4176247..4187041
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACMX8W_RS21785 (ACMX8W_21785) rocD 4176520..4177725 (-) 1206 WP_047183487.1 ornithine aminotransferase -
  ACMX8W_RS21790 (ACMX8W_21790) rocR 4177966..4179351 (+) 1386 WP_047183488.1 arginine utilization regulatory protein RocR -
  ACMX8W_RS21795 (ACMX8W_21795) - 4179333..4179698 (-) 366 Protein_4241 sensor histidine kinase -
  ACMX8W_RS21800 (ACMX8W_21800) - 4179818..4179943 (-) 126 Protein_4242 hypothetical protein -
  ACMX8W_RS21805 (ACMX8W_21805) htrA 4179963..4181165 (-) 1203 WP_021481077.1 serine protease HtrC Regulator
  ACMX8W_RS21810 (ACMX8W_21810) vicX 4181247..4182041 (-) 795 WP_015483958.1 MBL fold metallo-hydrolase Regulator
  ACMX8W_RS21815 (ACMX8W_21815) walI 4182063..4182905 (-) 843 WP_003244037.1 WalRK two-component regulatory system regulator WalI -
  ACMX8W_RS21820 (ACMX8W_21820) walH 4182892..4184259 (-) 1368 WP_047183604.1 WalRK two-component regulatory system regulator WalH -
  ACMX8W_RS21825 (ACMX8W_21825) walK 4184249..4186084 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  ACMX8W_RS21830 (ACMX8W_21830) walR 4186092..4186799 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29282.29 Da        Isoelectric Point: 6.0287

>NTDB_id=974935 ACMX8W_RS21810 WP_015483958.1 4181247..4182041(-) (vicX) [Bacillus subtilis strain Z-294]
MSLQFSVLASGSTGNAFYLETENHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=974935 ACMX8W_RS21810 WP_015483958.1 4181247..4182041(-) (vicX) [Bacillus subtilis strain Z-294]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGAATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCAATGGAGAC
GGTGAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTTTCCCACGATGCGGCGGAACCGATGTTTTATGTATTCC
ATTATAACGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGAATGAAAGGCATTATCCGTTCAGCG
AATGTGTTTGTGTTTGAAAGCAATCACGATGTCGGCATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTTTCAAATGAAGATGCTGCTTTGGCAATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAATAACATGAAGGAGCTGGCAAGAATGTCTGTACAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACAGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53