Detailed information NTG0974886

Bioinformatically predicted

Overview

• Name: abrB
• Type: Regulator
• Locus tag: AABL52_RS17130
• Genome accession: NZ_CP151108
• Coordinates: 3347231..3347518 (-)
• Length: 95 a.a.
• NCBI ID: WP_000648284.1
• Uniprot ID: A0A161TTF2
• Organism: Bacillus paramobilis strain IMGN7
• Function: repression of comK; repression of rok (predicted from homology) Competence regulation

Genomic Context

Location: 3342231..3352518

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABL52_RS17110 (AABL52_17110)	-	3342655..3343515 (+)	861	WP_340421550.1	AraC family transcriptional regulator	-
AABL52_RS17115 (AABL52_17115)	-	3343585..3344448 (+)	864	WP_340421549.1	helix-turn-helix domain-containing protein	-
AABL52_RS17120 (AABL52_17120)	ugpC	3344713..3345816 (+)	1104	WP_340421548.1	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	-
AABL52_RS17125 (AABL52_17125)	-	3346026..3346976 (-)	951	WP_341518023.1	serine protease	-
AABL52_RS17130 (AABL52_17130)	abrB	3347231..3347518 (-)	288	WP_000648284.1	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	Regulator
AABL52_RS17135 (AABL52_17135)	-	3347634..3349514 (-)	1881	WP_341518024.1	ABC transporter permease	-
AABL52_RS17140 (AABL52_17140)	nadE	3349785..3350603 (+)	819	WP_097843375.1	ammonia-dependent NAD(+) synthetase	-
AABL52_RS17145 (AABL52_17145)	-	3350803..3351264 (-)	462	WP_341518025.1	NUDIX hydrolase	-
AABL52_RS17150 (AABL52_17150)	-	3351295..3351492 (-)	198	WP_000362873.1	DUF4083 domain-containing protein	-

Sequence

Protein

• Length: 95 a.a.
• Molecular weight: 10648.40 Da
• Isoelectric Point: 5.8692

>NTDB_id=974886 AABL52_RS17130 WP_000648284.1 3347231..3347518(-) (abrB) [Bacillus paramobilis strain IMGN7]
MKATGIIRKVDELGRIVIPKELREVLGIQIKSPLEIFVEEEKIILQKYQPYNACQITGDVSDQNISLANGNITVSIDGAK
HLIKEIEKFLNKSEA

Nucleotide

• Length: 288 bp

>NTDB_id=974886 AABL52_RS17130 WP_000648284.1 3347231..3347518(-) (abrB) [Bacillus paramobilis strain IMGN7]
ATGAAAGCAACAGGAATTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATTCCTAAAGAGTTACGAGAAGTATTAGG
AATCCAAATCAAATCACCACTTGAAATTTTCGTAGAAGAAGAAAAAATCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAGATCAAAACATATCATTAGCAAATGGAAACATTACTGTTAGTATAGATGGAGCGAAA
CATTTAATAAAAGAAATAGAGAAGTTTTTAAATAAGAGTGAAGCTTAG

Domains

Predicted by InterproScan.

• Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin) (8-49)

• AbrB C-terminal domain (AbrB_C) (53-88)

3D structure

• AlphaFold DB: A0A161TTF2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
abrB	Bacillus subtilis subsp. subtilis str. 168	58.889	94.737	0.558