Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   AABL52_RS07500 Genome accession   NZ_CP151108
Coordinates   1416481..1416939 (-) Length   152 a.a.
NCBI ID   WP_000804861.1    Uniprot ID   A0A164Q4K6
Organism   Bacillus paramobilis strain IMGN7     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1411481..1421939
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AABL52_RS07475 (AABL52_07475) - 1411975..1412475 (+) 501 WP_097843836.1 hypothetical protein -
  AABL52_RS07480 (AABL52_07480) tnpB 1412954..1414081 (+) 1128 WP_341519125.1 IS200/IS605 family element RNA-guided endonuclease TnpB -
  AABL52_RS07485 (AABL52_07485) - 1414059..1414322 (-) 264 WP_341519126.1 hypothetical protein -
  AABL52_RS07490 (AABL52_07490) - 1414486..1415127 (+) 642 WP_000680839.1 diguanylate cyclase -
  AABL52_RS07495 (AABL52_07495) - 1415787..1416449 (+) 663 WP_000922496.1 YkyA family protein -
  AABL52_RS07500 (AABL52_07500) kre 1416481..1416939 (-) 459 WP_000804861.1 YkyB family protein Regulator
  AABL52_RS07505 (AABL52_07505) ppx 1417117..1418655 (+) 1539 WP_341519127.1 exopolyphosphatase -
  AABL52_RS07510 (AABL52_07510) - 1418763..1420871 (+) 2109 WP_340421318.1 polyphosphate kinase -
  AABL52_RS07515 (AABL52_07515) - 1421048..1421284 (-) 237 WP_061678291.1 hypothetical protein -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17770.49 Da        Isoelectric Point: 10.6793

>NTDB_id=974879 AABL52_RS07500 WP_000804861.1 1416481..1416939(-) (kre) [Bacillus paramobilis strain IMGN7]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLIAEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTNLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=974879 AABL52_RS07500 WP_000804861.1 1416481..1416939(-) (kre) [Bacillus paramobilis strain IMGN7]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCTGCAACTAATCCGAAGTATTTATATTGGTTAAAAAAGACGGCTTTAGAACGCTTAATTGCTGAAA
AAAAAGCTATTAAAGAAGGATTACATTTTTCTAGAAATCCACGCTTTAGCCAACAACAATCGGATGTTCTTATCCGTTTA
GGTGATTATTTTTTCCATATTCCTCCTACAAAAGAAGATTTTCGAATCCTACCACATCTTGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAAACTTATCTTTAACAGTAGCAAAAAAGACACTTCAAGATTATATTGGTCCTGAAGCACTAAAAC
AAGAGAAAAAATTAAGTGAACCTGTCCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A164Q4K6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493

Multiple sequence alignment