Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ACMX77_RS18930 Genome accession   NZ_CP180438
Coordinates   3596666..3597379 (-) Length   237 a.a.
NCBI ID   WP_174616669.1    Uniprot ID   -
Organism   Bacillus subtilis strain W-2     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3591666..3602379
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACMX77_RS18910 (ACMX77_18910) ghrB 3591811..3592788 (+) 978 WP_080344231.1 2-hydroxyacid dehydrogenase -
  ACMX77_RS18915 (ACMX77_18915) psdB 3592825..3594765 (-) 1941 WP_047183244.1 lantibiotic ABC transporter permease PsdB -
  ACMX77_RS18920 (ACMX77_18920) psdA 3594740..3595519 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  ACMX77_RS18925 (ACMX77_18925) psdS 3595602..3596672 (-) 1071 WP_047183245.1 two-component sensor histidine kinase PsdS -
  ACMX77_RS18930 (ACMX77_18930) braR 3596666..3597379 (-) 714 WP_174616669.1 two-component system response regulator PsdR Regulator
  ACMX77_RS18935 (ACMX77_18935) yvzJ 3597526..3597735 (+) 210 WP_003243327.1 lipoprotein -
  ACMX77_RS18940 (ACMX77_18940) yvcN 3597771..3598535 (-) 765 WP_080344232.1 arylamine N-acetyltransferase family protein -
  ACMX77_RS18945 (ACMX77_18945) crh 3598536..3598793 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  ACMX77_RS18950 (ACMX77_18950) whiA 3598818..3599768 (-) 951 WP_047183247.1 DNA-binding protein WhiA -
  ACMX77_RS18955 (ACMX77_18955) mgfK 3599791..3600744 (-) 954 WP_047183589.1 gluconeogenesis morphogenetic factor -
  ACMX77_RS18960 (ACMX77_18960) rapZ 3600746..3601633 (-) 888 WP_003243903.1 RNase adapter RapZ -
  ACMX77_RS18965 (ACMX77_18965) rppI 3601658..3602134 (-) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27510.39 Da        Isoelectric Point: 4.6774

>NTDB_id=974768 ACMX77_RS18930 WP_174616669.1 3596666..3597379(-) (braR) [Bacillus subtilis strain W-2]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAERLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVVAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=974768 ACMX77_RS18930 WP_174616669.1 3596666..3597379(-) (braR) [Bacillus subtilis strain W-2]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACGGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACTTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGGTGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATACTCGCCCTCTTTGCCGCAGGAATCCAGAATAG
TGGAGCTTGGCGGGCTGACGATTTATCCTGATCAGAATGAGGCCGAATGGAACAGCGTCCGTATTTTGTTTTCACAAAAA
GAATTTCAGCTTCTCTCTATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.089

94.515

0.426