Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ACMX77_RS16505 Genome accession   NZ_CP180438
Coordinates   3131163..3131858 (-) Length   231 a.a.
NCBI ID   WP_015483587.1    Uniprot ID   -
Organism   Bacillus subtilis strain W-2     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3126163..3136858
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACMX77_RS16485 (ACMX77_16485) yttA 3126590..3127336 (+) 747 WP_047183060.1 LMBR1 domain-containing protein -
  ACMX77_RS16490 (ACMX77_16490) bceB 3127373..3129313 (-) 1941 WP_047183061.1 bacitracin ABC transporter permease BceB -
  ACMX77_RS16495 (ACMX77_16495) bceA 3129303..3130064 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  ACMX77_RS16500 (ACMX77_16500) bceS 3130166..3131170 (-) 1005 WP_015384427.1 two-component sensor histidine kinase BceS -
  ACMX77_RS16505 (ACMX77_16505) braR 3131163..3131858 (-) 696 WP_015483587.1 two-component response regulator BceR Regulator
  ACMX77_RS16510 (ACMX77_16510) ytrF 3131955..3133265 (-) 1311 WP_047183062.1 ABC transporter permease YtrF -
  ACMX77_RS16515 (ACMX77_16515) ytrE 3133255..3133950 (-) 696 WP_047183063.1 ABC transporter ATP-binding protein YtrE -
  ACMX77_RS16520 (ACMX77_16520) ytrD 3133965..3134942 (-) 978 WP_174616781.1 ABC transporter permease YtrD -
  ACMX77_RS16525 (ACMX77_16525) ytrC 3134972..3135958 (-) 987 WP_047183065.1 ABC transporter permease YtrC -
  ACMX77_RS16530 (ACMX77_16530) ytrB 3135952..3136830 (-) 879 WP_047183066.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26921.82 Da        Isoelectric Point: 5.3731

>NTDB_id=974758 ACMX77_RS16505 WP_015483587.1 3131163..3131858(-) (braR) [Bacillus subtilis strain W-2]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPNTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDVLQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=974758 ACMX77_RS16505 WP_015483587.1 3131163..3131858(-) (braR) [Bacillus subtilis strain W-2]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAATACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGTCCTGCAGCTTGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(5-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377