Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACMX77_RS05530 Genome accession   NZ_CP180438
Coordinates   1063312..1064055 (+) Length   247 a.a.
NCBI ID   WP_003233230.1    Uniprot ID   G4NRP4
Organism   Bacillus subtilis strain W-2     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1058312..1069055
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACMX77_RS05495 (ACMX77_05495) yhaI 1058641..1058982 (+) 342 WP_009966921.1 YhaI family protein -
  ACMX77_RS05500 (ACMX77_05500) scoC 1058979..1059590 (-) 612 WP_047182361.1 HTH-type transcriptional regulator Hpr -
  ACMX77_RS05505 (ACMX77_05505) yhaH 1059768..1060124 (-) 357 WP_003245875.1 YtxH domain-containing protein -
  ACMX77_RS05510 (ACMX77_05510) - 1060253..1060444 (+) 192 WP_014476318.1 hypothetical protein -
  ACMX77_RS05515 (ACMX77_05515) trpP 1060518..1061036 (-) 519 WP_003233236.1 tryptophan transporter TrpP -
  ACMX77_RS05520 (ACMX77_05520) serC 1061161..1062240 (-) 1080 WP_047182362.1 3-phosphoserine/phosphohydroxythreonine transaminase -
  ACMX77_RS05525 (ACMX77_05525) hinT 1062387..1062824 (-) 438 WP_003233231.1 HIT family protein -
  ACMX77_RS05530 (ACMX77_05530) pptA 1063312..1064055 (+) 744 WP_003233230.1 ABC transporter ATP-binding protein EcsA Regulator
  ACMX77_RS05535 (ACMX77_05535) ecsB 1064048..1065274 (+) 1227 WP_017695369.1 ABC transporter permease EcsB -
  ACMX77_RS05540 (ACMX77_05540) ecsC 1065294..1066004 (+) 711 WP_047182363.1 EcsC family protein -
  ACMX77_RS05545 (ACMX77_05545) sndC 1066022..1067212 (-) 1191 WP_047182364.1 N-acetyl amino acid acetylase SndC -
  ACMX77_RS05550 (ACMX77_05550) - 1067284..1068675 (-) 1392 WP_174616545.1 hypothetical protein -

Sequence

Protein


Download         Length: 247 a.a.        Molecular weight: 27722.20 Da        Isoelectric Point: 5.9114

>NTDB_id=974672 ACMX77_RS05530 WP_003233230.1 1063312..1064055(+) (pptA) [Bacillus subtilis strain W-2]
MSLLSVKDLTGGYTRNPVLKNVSFTLEPNQIVGLIGLNGAGKSTTIRHIIGLMDPHKGSIELNGKTFAEDPEGYRSQFTY
IPETPVLYEELTLMEHLELTAMAYGLSKETMEKRLPPLLKEFRMEKRLKWFPAHFSKGMKQKVMIMCAFLAEPALYIIDE
PFLGLDPLAINALLERMNEAKKGGASVLMSTHILATAERYCDSFIILHNGEVRARGTLSELREQFGMKDAALDDLYLELT
KEDAGHE

Nucleotide


Download         Length: 744 bp        

>NTDB_id=974672 ACMX77_RS05530 WP_003233230.1 1063312..1064055(+) (pptA) [Bacillus subtilis strain W-2]
ATGTCTCTGCTATCGGTAAAAGACTTGACCGGCGGATATACAAGGAATCCGGTTTTAAAAAACGTATCATTCACCCTTGA
ACCGAATCAAATTGTCGGATTAATCGGGCTGAATGGTGCTGGTAAAAGTACAACAATCAGACACATCATCGGGCTGATGG
ACCCGCATAAAGGTTCAATCGAATTAAACGGTAAAACGTTTGCTGAGGATCCGGAAGGCTACCGTTCACAATTTACCTAT
ATACCTGAAACACCTGTTTTATACGAAGAATTGACGCTGATGGAGCATCTTGAACTAACAGCCATGGCATATGGACTGTC
AAAAGAAACGATGGAGAAAAGGCTGCCTCCGCTACTAAAGGAATTCCGAATGGAAAAGAGGCTGAAGTGGTTCCCGGCCC
ATTTTTCTAAAGGAATGAAGCAGAAGGTTATGATTATGTGCGCATTTTTGGCAGAGCCTGCGCTCTACATTATTGATGAG
CCTTTTCTAGGGCTTGATCCGCTTGCCATTAACGCGCTGCTTGAACGGATGAATGAAGCGAAAAAAGGCGGGGCGAGCGT
ACTGATGTCAACACACATTTTGGCAACGGCAGAACGCTATTGCGATTCGTTTATTATTTTACATAACGGCGAGGTGCGGG
CGCGCGGCACGCTGTCAGAGCTCAGAGAGCAGTTTGGAATGAAGGACGCGGCGCTGGACGATTTGTATCTTGAGCTTACA
AAGGAAGACGCTGGCCATGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-162)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NRP4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

56.904

96.761

0.551
  pptA Streptococcus thermophilus LMD-9

56.485

96.761

0.547