Detailed information NTG0974649

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ACMX77_RS01620
• Genome accession: NZ_CP180438
• Coordinates: 293217..294338 (+)
• Length: 373 a.a.
• NCBI ID: WP_015715201.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain W-2
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 288217..299338

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMX77_RS01595 (ACMX77_01595)	ycdA	288222..289286 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
ACMX77_RS01600 (ACMX77_01600)	-	289309..289440 (-)	132	WP_003246334.1	hypothetical protein	-
ACMX77_RS01605 (ACMX77_01605)	ycdB	289614..291035 (+)	1422	WP_047182035.1	YcdB/YcdC domain-containing protein	-
ACMX77_RS01610 (ACMX77_01610)	ycdC	291222..292583 (+)	1362	WP_047183527.1	YcdB/YcdC domain-containing protein	-
ACMX77_RS01615 (ACMX77_01615)	cwlK	292591..293094 (-)	504	WP_047182036.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
ACMX77_RS01620 (ACMX77_01620)	rapF	293217..294338 (+)	1122	WP_015715201.1	response regulator aspartate phosphatase RapJ	Regulator
ACMX77_RS01625 (ACMX77_01625)	ycdF	294446..295222 (+)	777	WP_015382686.1	SDR family oxidoreductase	-
ACMX77_RS01630 (ACMX77_01630)	ycdG	295247..296932 (+)	1686	WP_047182037.1	glycoside hydrolase family 13 protein	-
ACMX77_RS01635 (ACMX77_01635)	znuA	297120..298079 (+)	960	WP_047182038.1	metal ABC transporter substrate-binding protein	-
ACMX77_RS01640 (ACMX77_01640)	znuC	298134..298829 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44400.29 Da
• Isoelectric Point: 4.8344

>NTDB_id=974649 ACMX77_RS01620 WP_015715201.1 293217..294338(+) (rapF) [Bacillus subtilis strain W-2]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=974649 ACMX77_RS01620 WP_015715201.1 293217..294338(+) (rapF) [Bacillus subtilis strain W-2]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGCCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATCGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCATACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCCGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405