Detailed information NTG0974584

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACMHOZ_RS05565
• Genome accession: NZ_CP180393
• Coordinates: 1137083..1138108 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain JMK_KBN3987
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1132083..1143108

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMHOZ_RS05535 (ACMHOZ_05535)	zapB	1132167..1132412 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ACMHOZ_RS05540 (ACMHOZ_05540)	rraA	1132497..1132982 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACMHOZ_RS05545 (ACMHOZ_05545)	menA	1133075..1134001 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACMHOZ_RS05550 (ACMHOZ_05550)	hslU	1134068..1135399 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ACMHOZ_RS05555 (ACMHOZ_05555)	hslV	1135409..1135939 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACMHOZ_RS05560 (ACMHOZ_05560)	ftsN	1136032..1136991 (-)	960	WP_000068834.1	cell division protein FtsN	-
ACMHOZ_RS05565 (ACMHOZ_05565)	cytR	1137083..1138108 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACMHOZ_RS05570 (ACMHOZ_05570)	priA	1138264..1140462 (-)	2199	WP_001590975.1	primosomal protein N'	Machinery gene
ACMHOZ_RS05575 (ACMHOZ_05575)	rpmE	1140665..1140877 (+)	213	WP_000710769.1	50S ribosomal protein L31	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=974584 ACMHOZ_RS05565 WP_000644904.1 1137083..1138108(-) (cytR) [Escherichia coli strain JMK_KBN3987]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=974584 ACMHOZ_RS05565 WP_000644904.1 1137083..1138108(-) (cytR) [Escherichia coli strain JMK_KBN3987]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628