Detailed information NTG0974544

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACMG4D_RS22650
• Genome accession: NZ_CP180222
• Coordinates: 4692298..4693323 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain Q65
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4687298..4698323

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMG4D_RS22630 (ACMG4D_22630)	metJ	4688483..4688800 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ACMG4D_RS22635 (ACMG4D_22635)	yiiX	4688860..4689468 (+)	609	WP_000702318.1	YiiX family permuted papain-like enzyme	-
ACMG4D_RS22640 (ACMG4D_22640)	rpmE	4689529..4689741 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACMG4D_RS22645 (ACMG4D_22645)	priA	4689944..4692142 (+)	2199	WP_001309891.1	primosomal protein N'	Machinery gene
ACMG4D_RS22650 (ACMG4D_22650)	cytR	4692298..4693323 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACMG4D_RS22655 (ACMG4D_22655)	ftsN	4693415..4694374 (+)	960	WP_000068844.1	cell division protein FtsN	-
ACMG4D_RS22660 (ACMG4D_22660)	hslV	4694467..4694997 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACMG4D_RS22665 (ACMG4D_22665)	hslU	4695007..4696338 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ACMG4D_RS22670 (ACMG4D_22670)	menA	4696405..4697331 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACMG4D_RS22675 (ACMG4D_22675)	rraA	4697424..4697909 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=974544 ACMG4D_RS22650 WP_000644904.1 4692298..4693323(+) (cytR) [Escherichia coli strain Q65]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=974544 ACMG4D_RS22650 WP_000644904.1 4692298..4693323(+) (cytR) [Escherichia coli strain Q65]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGACGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628