Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACK8DB_RS05230 Genome accession   NZ_CP179875
Coordinates   1123402..1124343 (+) Length   313 a.a.
NCBI ID   WP_002131994.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain MRSN548102     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1118402..1129343
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK8DB_RS05220 (ACK8DB_05220) basA 1118825..1120672 (+) 1848 WP_004746535.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -
  ACK8DB_RS05225 (ACK8DB_05225) basB 1120743..1122770 (-) 2028 WP_109433740.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  ACK8DB_RS05230 (ACK8DB_05230) ceuB 1123402..1124343 (+) 942 WP_002131994.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  ACK8DB_RS05235 (ACK8DB_05235) bauC 1124343..1125290 (+) 948 WP_004739506.1 ferric acinetobactin ABC transporter permease subunit BauC -
  ACK8DB_RS05240 (ACK8DB_05240) bauE 1125287..1126057 (+) 771 WP_004746541.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  ACK8DB_RS05245 (ACK8DB_05245) bauB 1126064..1127032 (+) 969 WP_004746542.1 siderophore-binding periplasmic lipoprotein BauB -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 34007.08 Da        Isoelectric Point: 8.6941

>NTDB_id=974273 ACK8DB_RS05230 WP_002131994.1 1123402..1124343(+) (ceuB) [Acinetobacter baumannii strain MRSN548102]
MRFGLFCIFIILCICSLLLGAEQIQWSTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYAAIAAIGLLLVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLICDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=974273 ACK8DB_RS05230 WP_002131994.1 1123402..1124343(+) (ceuB) [Acinetobacter baumannii strain MRSN548102]
ATGCGATTTGGCTTATTCTGTATTTTTATCATTTTATGTATTTGCTCATTATTGCTCGGGGCTGAACAAATACAGTGGTC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGTCGTATTCCTCGTTTAATTACCATTGTGCTTA
CCGGTATCGGGTTGGCGGTATGTGGCGTCATCTTGCAGCATATTGTGCGTAACAAGTTTGTTGAACCGGAAACTTCGGGT
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCATTAACTTTAGTTCCGGTAACCAGCACGCTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATTCGGCGGATCCGTTTTAGAAATACGGTTTTAG
TACCTGTTATTGGCTTGATGTACGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCATATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGCCACTATGAAGTTATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTTGCACACCGCTTTACCGTAATTGGTATGGGGGAAGAGATGGCTTCTAGCTTGGGACTCA
GTTATGCAGCTATAGCCGCCATTGGTTTGTTACTGGTTGCCATTACAGTTTCGACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTAGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCCATTGTGGC
TTTAGGTGGGGCGTCTCTATTACTGATTTGTGACATTCTTGGCCGCTCGATTATTTATCCATTTGAAGTGCCGATCGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTTAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.257

94.569

0.419