Detailed information NTG0974205

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: AABD46_RS21495
• Genome accession: NZ_CP150948
• Coordinates: 1294317..1295414 (-)
• Length: 365 a.a.
• NCBI ID: WP_005463467.1
• Uniprot ID: Q87GU4
• Organism: Vibrio parahaemolyticus strain vp-HL-202212
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1289317..1300414

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABD46_RS21480 (AABD46_21480)	-	1289981..1291036 (-)	1056	WP_029824929.1	HlyD family secretion protein	-
AABD46_RS21485 (AABD46_21485)	-	1291074..1291529 (-)	456	WP_193237436.1	MarR family transcriptional regulator	-
AABD46_RS21490 (AABD46_21490)	luxQ	1291741..1294317 (-)	2577	WP_005477121.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	-
AABD46_RS21495 (AABD46_21495)	luxP	1294317..1295414 (-)	1098	WP_005463467.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
AABD46_RS21500 (AABD46_21500)	-	1295766..1296086 (-)	321	WP_140103889.1	GIY-YIG nuclease family protein	-
AABD46_RS21505 (AABD46_21505)	-	1296083..1296733 (-)	651	WP_159404373.1	YceH family protein	-
AABD46_RS21510 (AABD46_21510)	-	1296910..1297125 (-)	216	WP_005477197.1	hypothetical protein	-
AABD46_RS21515 (AABD46_21515)	-	1297452..1297766 (+)	315	WP_005453573.1	DUF496 family protein	-
AABD46_RS21520 (AABD46_21520)	-	1297889..1299208 (+)	1320	WP_140103892.1	MATE family efflux transporter	-
AABD46_RS21525 (AABD46_21525)	-	1299299..1300276 (-)	978	WP_140103890.1	Gfo/Idh/MocA family oxidoreductase	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41339.67 Da
• Isoelectric Point: 5.0568

>NTDB_id=974205 AABD46_RS21495 WP_005463467.1 1294317..1295414(-) (luxP) [Vibrio parahaemolyticus strain vp-HL-202212]
MNKALVLSLISIAGMSPASQASQVLNGYWAYQEFLNEFPEQKHLTDALAAAVRDDPVPIAPEKRHPLKISVVYPGQQISD
YWIRNIDAFEKRLDKLNIDYQINQVFTRPNADIKQQSLSLMEALKSNSDYLIFTLDTTRHRKFVEHVLDSTKTKLILQNI
TTPVREWETRQPFMYVGFDHAEGSRELAVEFGKQFPKNTHYSVLYFSEGYISDIRGNTFIHQVNQDSQFELQSAYYTKAT
KQSGYEAAKASLKKYPDVEFIYACSTDVALGAVEALSELGREDVMINGWGGGSAELDAILKGELDITVMRMNDDTGIAMA
EAIKWDLEGKPVPTVYSGDFEVVTKSDSPERIEALRKRAFRYSDN

Nucleotide

• Length: 1098 bp

>NTDB_id=974205 AABD46_RS21495 WP_005463467.1 1294317..1295414(-) (luxP) [Vibrio parahaemolyticus strain vp-HL-202212]
ATGAATAAAGCGTTAGTATTGTCCCTGATTTCAATTGCCGGCATGTCTCCGGCTTCACAAGCCTCTCAGGTTCTTAACGG
CTACTGGGCGTATCAAGAATTCTTAAATGAATTTCCAGAACAGAAACACTTAACGGATGCTCTGGCTGCGGCCGTGAGAG
ACGATCCTGTACCTATTGCCCCTGAAAAAAGACACCCATTAAAAATCTCCGTTGTTTATCCAGGGCAGCAGATTTCTGAT
TACTGGATAAGAAACATCGACGCGTTTGAGAAGCGCTTAGATAAACTCAATATTGATTACCAAATCAATCAAGTGTTTAC
GCGACCAAACGCCGATATCAAACAACAAAGCCTTTCTTTGATGGAAGCACTGAAAAGCAATTCCGACTACTTAATTTTTA
CACTCGATACGACCCGACATCGTAAGTTTGTCGAACACGTTTTAGATTCCACCAAAACCAAACTTATCCTGCAAAATATC
ACGACGCCAGTCCGTGAATGGGAAACTCGACAGCCTTTTATGTACGTCGGTTTCGATCACGCTGAAGGCAGTCGCGAACT
CGCTGTGGAGTTTGGCAAGCAGTTCCCGAAAAATACCCATTACAGCGTTTTGTACTTCTCTGAAGGCTACATTAGCGATA
TCCGTGGTAACACATTCATTCACCAAGTGAACCAAGACAGTCAGTTTGAACTACAATCTGCTTACTATACAAAAGCGACA
AAACAGTCCGGGTATGAAGCTGCAAAAGCCAGCTTGAAAAAATACCCAGATGTGGAGTTCATTTATGCTTGTTCTACCGA
CGTTGCGTTAGGTGCCGTCGAAGCACTGTCTGAACTTGGCCGTGAAGACGTAATGATTAATGGCTGGGGCGGTGGTTCTG
CTGAGCTAGACGCTATCTTAAAAGGGGAGTTAGATATCACCGTCATGCGTATGAATGATGATACTGGCATTGCGATGGCA
GAGGCGATCAAATGGGATTTGGAAGGTAAGCCTGTACCAACGGTGTACTCTGGGGACTTCGAAGTTGTGACCAAATCAGA
TTCCCCTGAGCGAATTGAAGCTCTCAGAAAACGTGCATTTAGATACTCAGATAATTGA

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (69-324)

3D structure

• AlphaFold DB: Q87GU4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	64.56	99.726	0.644