Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACK8DA_RS13840 Genome accession   NZ_CP179869
Coordinates   2861420..2862361 (-) Length   313 a.a.
NCBI ID   WP_002131994.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain MRSN122172     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2856420..2867361
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK8DA_RS13825 (ACK8DA_13825) bauB 2858731..2859699 (-) 969 WP_004746542.1 siderophore-binding periplasmic lipoprotein BauB -
  ACK8DA_RS13830 (ACK8DA_13830) bauE 2859706..2860476 (-) 771 WP_004746541.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  ACK8DA_RS13835 (ACK8DA_13835) bauC 2860473..2861420 (-) 948 WP_004739506.1 ferric acinetobactin ABC transporter permease subunit BauC -
  ACK8DA_RS13840 (ACK8DA_13840) ceuB 2861420..2862361 (-) 942 WP_002131994.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  ACK8DA_RS13845 (ACK8DA_13845) basB 2862993..2865020 (+) 2028 WP_109433740.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  ACK8DA_RS13850 (ACK8DA_13850) basA 2865091..2866938 (-) 1848 WP_004746535.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 34007.08 Da        Isoelectric Point: 8.6941

>NTDB_id=974136 ACK8DA_RS13840 WP_002131994.1 2861420..2862361(-) (ceuB) [Acinetobacter baumannii strain MRSN122172]
MRFGLFCIFIILCICSLLLGAEQIQWSTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYAAIAAIGLLLVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLICDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=974136 ACK8DA_RS13840 WP_002131994.1 2861420..2862361(-) (ceuB) [Acinetobacter baumannii strain MRSN122172]
ATGCGATTTGGCTTATTCTGTATTTTTATCATTTTATGTATTTGCTCATTATTGCTCGGGGCTGAACAAATACAGTGGTC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGTCGTATTCCTCGTTTAATTACCATTGTGCTTA
CCGGTATCGGGTTGGCGGTATGTGGCGTCATCTTGCAGCATATTGTGCGTAACAAGTTTGTTGAACCGGAAACTTCGGGT
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCATTAACTTTAGTTCCGGTAACCAGCACGCTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATTCGGCGGATCCGTTTTAGAAATACGGTTTTAG
TACCTGTTATTGGCTTGATGTACGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCATATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGCCACTATGAAGTTATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTTGCACACCGCTTTACCGTAATTGGTATGGGGGAAGAGATGGCTTCTAGCTTGGGACTCA
GTTATGCAGCTATAGCCGCCATTGGTTTGTTACTGGTTGCCATTACAGTTTCGACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTAGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCCATTGTGGC
TTTAGGTGGGGCGTCTCTATTACTGATTTGTGACATTCTTGGCCGCTCGATTATTTATCCATTTGAAGTGCCGATCGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTTAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.257

94.569

0.419