Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AABM54_RS24615 Genome accession   NZ_CP150918
Coordinates   5459070..5459474 (-) Length   134 a.a.
NCBI ID   WP_347902504.1    Uniprot ID   -
Organism   Pseudomonas purpurea strain DGS26     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5454070..5464474
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AABM54_RS24600 - 5455846..5457906 (-) 2061 WP_347902501.1 methyl-accepting chemotaxis protein -
  AABM54_RS24605 - 5458097..5458636 (-) 540 WP_347902502.1 chemotaxis protein CheW -
  AABM54_RS24610 pilH 5458647..5459012 (-) 366 WP_347902503.1 twitching motility response regulator PilH -
  AABM54_RS24615 pilG 5459070..5459474 (-) 405 WP_347902504.1 twitching motility response regulator PilG Regulator
  AABM54_RS24620 gshB 5459736..5460689 (+) 954 WP_347902505.1 glutathione synthase -
  AABM54_RS24625 - 5460791..5461690 (+) 900 WP_347902506.1 energy transducer TonB -
  AABM54_RS24630 - 5461918..5462487 (+) 570 WP_347902507.1 YqgE/AlgH family protein -
  AABM54_RS24635 ruvX 5462487..5462924 (+) 438 WP_347902508.1 Holliday junction resolvase RuvX -
  AABM54_RS24640 pyrR 5463020..5463526 (+) 507 WP_347902509.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14628.94 Da        Isoelectric Point: 6.8616

>NTDB_id=973791 AABM54_RS24615 WP_347902504.1 5459070..5459474(-) (pilG) [Pseudomonas purpurea strain DGS26]
MEQHSNALKVMVIDDSKTIRRTAETLLRNVGCEVITAVDGFDALAKIADHHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLDAIQAHVPGFAAVSPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=973791 AABM54_RS24615 WP_347902504.1 5459070..5459474(-) (pilG) [Pseudomonas purpurea strain DGS26]
ATGGAACAGCATTCCAACGCCTTGAAGGTCATGGTGATCGACGATTCGAAAACCATACGCCGCACGGCCGAAACGTTGTT
GCGCAACGTCGGCTGCGAGGTGATTACGGCGGTCGATGGTTTCGATGCCCTGGCCAAGATTGCCGATCATCATCCGGGGA
TCATTTTTGTCGACATCATGATGCCGCGTCTGGATGGTTATCAGACCTGCGCTTTAATCAAGAACAACAGTGCGTTCAAG
TCCACGCCAGTGATTATGCTGTCGTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGTTCCGACCAGTT
CCTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGGACGCGATCCAGGCCCATGTTCCGGGCTTTGCCGCCGTTTCGCCGC
AGTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

93.284

0.709

Multiple sequence alignment