Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AABM55_RS27400 Genome accession   NZ_CP150917
Coordinates   5934173..5934577 (-) Length   134 a.a.
NCBI ID   WP_054594451.1    Uniprot ID   -
Organism   Pseudomonas helvetica strain DGS28     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5929173..5939577
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AABM55_RS27385 - 5930953..5933013 (-) 2061 WP_054594449.1 methyl-accepting chemotaxis protein -
  AABM55_RS27390 - 5933200..5933739 (-) 540 WP_054594450.1 chemotaxis protein CheW -
  AABM55_RS27395 pilH 5933750..5934115 (-) 366 WP_019694067.1 twitching motility response regulator PilH -
  AABM55_RS27400 pilG 5934173..5934577 (-) 405 WP_054594451.1 twitching motility response regulator PilG Regulator
  AABM55_RS27405 gshB 5934812..5935765 (+) 954 WP_347928225.1 glutathione synthase -
  AABM55_RS27410 - 5935843..5936742 (+) 900 WP_347928226.1 energy transducer TonB -
  AABM55_RS27415 - 5936983..5937552 (+) 570 WP_054594454.1 YqgE/AlgH family protein -
  AABM55_RS27420 ruvX 5937552..5937989 (+) 438 WP_054594455.1 Holliday junction resolvase RuvX -
  AABM55_RS27425 pyrR 5938085..5938591 (+) 507 WP_054594456.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14592.99 Da        Isoelectric Point: 7.2441

>NTDB_id=973764 AABM55_RS27400 WP_054594451.1 5934173..5934577(-) (pilG) [Pseudomonas helvetica strain DGS28]
MEQHSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLSAIQAHVPGFVVVSPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=973764 AABM55_RS27400 WP_054594451.1 5934173..5934577(-) (pilG) [Pseudomonas helvetica strain DGS28]
ATGGAACAGCATTCCAGCGCCTTGAAGGTCATGGTGATCGACGATTCGAAAACGATTCGCCGTACCGCCGAAACGTTGTT
GAAAAACGTGGGCTGTGAGGTCATCACGGCCATCGATGGTTTCGATGCCCTGGCCAAGATTGCCGACAATCATCCCGGCA
TCATCTTTGTCGACATCATGATGCCGCGTCTGGATGGCTATCAGACCTGCGCGTTGATCAAGAACAACAGCGCGTTCAAG
TCCACGCCAGTGATTATGCTGTCGTCCAAGGACGGGTTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGAGTGCGATCCAGGCCCATGTACCGGGCTTTGTCGTTGTTTCGCCGC
AGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

93.284

0.701

Multiple sequence alignment