Detailed information
Bioinformatically predicted
Overview
| Name | lrpC | Type | Machinery gene |
| Locus tag | ACKAX6_RS00275 | Genome accession | NZ_CP179215 |
| Coordinates | 62573..62986 (+) | Length | 137 a.a. |
| NCBI ID | WP_000998780.1 | Uniprot ID | C1PH97 |
| Organism | Staphylococcus aureus strain YNSA7 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 57573..67986
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACKAX6_RS00250 (ACKAX6_00250) | - | 57574..58860 (+) | 1287 | WP_000513494.1 | SIR2 family protein | - |
| ACKAX6_RS00255 (ACKAX6_00255) | - | 58866..60554 (+) | 1689 | WP_000555614.1 | ATP-binding protein | - |
| ACKAX6_RS00260 (ACKAX6_00260) | - | 60715..60852 (+) | 138 | WP_021758025.1 | hypothetical protein | - |
| ACKAX6_RS00265 (ACKAX6_00265) | - | 61115..61726 (+) | 612 | WP_000856594.1 | hypothetical protein | - |
| ACKAX6_RS00270 (ACKAX6_00270) | - | 62065..62472 (-) | 408 | WP_000173401.1 | hypothetical protein | - |
| ACKAX6_RS00275 (ACKAX6_00275) | lrpC | 62573..62986 (+) | 414 | WP_000998780.1 | Lrp/AsnC family transcriptional regulator | Machinery gene |
| ACKAX6_RS00280 (ACKAX6_00280) | - | 63048..63521 (+) | 474 | WP_000455975.1 | GNAT family N-acetyltransferase | - |
| ACKAX6_RS00285 (ACKAX6_00285) | - | 63629..64615 (-) | 987 | WP_000662031.1 | tRNA dihydrouridine synthase | - |
| ACKAX6_RS00290 (ACKAX6_00290) | - | 64923..65126 (+) | 204 | WP_000389759.1 | DUF6007 family protein | - |
| ACKAX6_RS00295 (ACKAX6_00295) | - | 65175..65471 (+) | 297 | WP_000179901.1 | TfoX/Sxy family protein | - |
| ACKAX6_RS00300 (ACKAX6_00300) | - | 65533..66753 (-) | 1221 | WP_000130756.1 | MFS transporter | - |
| ACKAX6_RS00305 (ACKAX6_00305) | - | 66746..67297 (-) | 552 | WP_000627025.1 | flavodoxin family protein | - |
| ACKAX6_RS00310 (ACKAX6_00310) | - | 67410..67922 (+) | 513 | Protein_59 | LysR family transcriptional regulator | - |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 15971.29 Da Isoelectric Point: 4.6692
>NTDB_id=973624 ACKAX6_RS00275 WP_000998780.1 62573..62986(+) (lrpC) [Staphylococcus aureus strain YNSA7]
MNDLINEKIINVLLNNSRITINELSKQVNLSAPAVRERVNKLEDQGIIKGYTINIDYKELGYDVEILIELTIKNNRYKDF
KEFISKQDNVEFCYRVSGEACFVFKVRLENMDEVETFVDTIQPYGQTKCQFIFSSVV
MNDLINEKIINVLLNNSRITINELSKQVNLSAPAVRERVNKLEDQGIIKGYTINIDYKELGYDVEILIELTIKNNRYKDF
KEFISKQDNVEFCYRVSGEACFVFKVRLENMDEVETFVDTIQPYGQTKCQFIFSSVV
Nucleotide
Download Length: 414 bp
>NTDB_id=973624 ACKAX6_RS00275 WP_000998780.1 62573..62986(+) (lrpC) [Staphylococcus aureus strain YNSA7]
ATGAATGACTTAATAAATGAAAAAATAATCAATGTTTTGTTAAATAATAGTAGAATTACTATTAATGAATTAAGTAAACA
AGTGAACTTATCTGCTCCAGCTGTAAGAGAAAGGGTAAATAAACTTGAAGATCAAGGTATTATAAAAGGTTATACAATTA
ACATAGATTATAAGGAATTAGGTTACGATGTAGAAATATTAATTGAGTTAACTATAAAGAATAATAGATACAAAGATTTT
AAAGAATTTATTTCAAAACAAGATAATGTTGAGTTTTGTTATCGTGTATCAGGAGAGGCATGTTTTGTATTTAAGGTTCG
GTTGGAAAATATGGATGAAGTGGAAACATTTGTTGATACCATACAACCATATGGGCAGACAAAATGTCAGTTTATCTTTT
CATCAGTTGTCTAA
ATGAATGACTTAATAAATGAAAAAATAATCAATGTTTTGTTAAATAATAGTAGAATTACTATTAATGAATTAAGTAAACA
AGTGAACTTATCTGCTCCAGCTGTAAGAGAAAGGGTAAATAAACTTGAAGATCAAGGTATTATAAAAGGTTATACAATTA
ACATAGATTATAAGGAATTAGGTTACGATGTAGAAATATTAATTGAGTTAACTATAAAGAATAATAGATACAAAGATTTT
AAAGAATTTATTTCAAAACAAGATAATGTTGAGTTTTGTTATCGTGTATCAGGAGAGGCATGTTTTGTATTTAAGGTTCG
GTTGGAAAATATGGATGAAGTGGAAACATTTGTTGATACCATACAACCATATGGGCAGACAAAATGTCAGTTTATCTTTT
CATCAGTTGTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lrpC | Bacillus subtilis subsp. subtilis str. 168 |
43.284 |
97.81 |
0.423 |