Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   UXQ99_RS13055 Genome accession   NZ_CP150893
Coordinates   2626145..2626819 (+) Length   224 a.a.
NCBI ID   WP_000866106.1    Uniprot ID   -
Organism   Staphylococcus aureus strain BSN182     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Related MGE


Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
IScluster/Tn 2617909..2630393 2626145..2626819 within 0


Gene organization within MGE regions


Location: 2617909..2630393
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  UXQ99_RS13015 (UXQ99_13015) - 2617909..2618808 (-) 900 WP_000196697.1 Mph(C) family macrolide 2'-phosphotransferase -
  UXQ99_RS13020 (UXQ99_13020) msr(A) 2618907..2620373 (-) 1467 WP_000438874.1 ABC-F type ribosomal protection protein Msr(A) -
  UXQ99_RS13025 (UXQ99_13025) - 2620847..2621521 (+) 675 WP_001105960.1 IS6 family transposase -
  UXQ99_RS13030 (UXQ99_13030) - 2621815..2621988 (-) 174 WP_000044738.1 hypothetical protein -
  UXQ99_RS13035 (UXQ99_13035) - 2622032..2622652 (-) 621 WP_000941203.1 LysE family transporter -
  UXQ99_RS13040 (UXQ99_13040) - 2622657..2623628 (-) 972 WP_000053810.1 fatty acid desaturase family protein -
  UXQ99_RS13045 (UXQ99_13045) - 2623727..2625139 (+) 1413 WP_000526300.1 PLP-dependent aminotransferase family protein -
  UXQ99_RS13050 (UXQ99_13050) - 2625331..2626005 (+) 675 WP_001105960.1 IS6 family transposase -
  UXQ99_RS13055 (UXQ99_13055) braR 2626145..2626819 (+) 675 WP_000866106.1 response regulator transcription factor Regulator
  UXQ99_RS13060 (UXQ99_13060) - 2626816..2627697 (+) 882 Protein_2529 sensor histidine kinase -
  UXQ99_RS13065 (UXQ99_13065) - 2627813..2628742 (+) 930 WP_000793446.1 ABC transporter ATP-binding protein -
  UXQ99_RS13070 (UXQ99_13070) - 2628735..2629472 (+) 738 WP_000369394.1 ABC transporter permease -
  UXQ99_RS13075 (UXQ99_13075) - 2629486..2629662 (+) 177 Protein_2532 undecaprenyl-diphosphate phosphatase -
  UXQ99_RS13080 (UXQ99_13080) - 2629719..2630393 (+) 675 WP_001105987.1 IS6-like element IS257 family transposase -

Sequence


Protein


Download         Length: 224 a.a.        Molecular weight: 25839.93 Da        Isoelectric Point: 4.9884

>NTDB_id=973583 UXQ99_RS13055 WP_000866106.1 2626145..2626819(+) (braR) [Staphylococcus aureus strain BSN182]
MKVLIVEDDLVIGKMLAEELKKWQLEPILIEGFNHVMDAFNTNAPELVLLDINLPAFNGYHWCQEIRKVSTVPIIFISSR
NDSMDQVMAMQMGADDFIEKPFNMTVTITKIQALLRRTYDFTTQVNNLTVDDCELLLDAAKLKFNEETIDLTHTELQIMH
SLFQNKGKFVSRNALIEKCWESEHFIDDNTLAVNITRLRKKLQKLGLTDFIETKKNVGYRVGDV

Nucleotide


Download         Length: 675 bp        

>NTDB_id=973583 UXQ99_RS13055 WP_000866106.1 2626145..2626819(+) (braR) [Staphylococcus aureus strain BSN182]
ATGAAAGTATTAATCGTAGAGGATGACTTAGTTATCGGGAAGATGCTTGCTGAAGAGCTCAAGAAGTGGCAGCTAGAACC
GATCTTAATAGAAGGTTTCAATCATGTAATGGATGCCTTCAACACGAATGCACCGGAACTTGTGTTACTCGATATTAATT
TACCTGCCTTCAATGGTTATCACTGGTGTCAGGAGATTCGTAAAGTTTCTACTGTACCGATTATATTTATTAGTTCGCGT
AACGACAGTATGGATCAAGTAATGGCGATGCAGATGGGTGCGGATGATTTCATTGAGAAGCCATTTAATATGACTGTTAC
AATTACTAAGATTCAAGCACTATTACGCCGCACGTATGATTTCACCACTCAAGTTAATAATTTAACAGTAGATGATTGCG
AGTTACTACTTGATGCAGCAAAGCTTAAATTTAATGAAGAAACCATAGACCTGACACACACTGAATTGCAAATCATGCAT
AGCTTATTCCAGAACAAGGGCAAATTCGTCAGTCGTAATGCGTTAATCGAAAAATGCTGGGAATCAGAACACTTCATTGA
TGACAATACGCTTGCTGTCAACATTACACGTTTACGCAAAAAGCTACAAAAACTAGGACTTACAGATTTTATCGAAACGA
AGAAAAATGTCGGATATCGTGTAGGTGACGTATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

66.516

98.661

0.656


Multiple sequence alignment