Detailed information NTG0973545

Bioinformatically predicted

Overview

• Name: ccrA
• Type: Machinery gene
• Locus tag: UXQ99_RS00185
• Genome accession: NZ_CP150893
• Coordinates: 41283..42644 (-)
• Length: 453 a.a.
• NCBI ID: WP_001631036.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain BSN182
• Function: promote SCCmec transfer (predicted from homology) Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
SCCmec	39658..47066	41283..42644	within	0

Gene organization within MGE regions

Location: 39658..47066

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
UXQ99_RS00180 (UXQ99_00180)	ccrB	39658..41286 (-)	1629	WP_001631035.1	recombinase family protein	Machinery gene
UXQ99_RS00185 (UXQ99_00185)	ccrA	41283..42644 (-)	1362	WP_001631036.1	recombinase family protein	Machinery gene
UXQ99_RS00190 (UXQ99_00190)	-	42831..43460 (-)	630	Protein_35	hypothetical protein	-
UXQ99_RS00195 (UXQ99_00195)	-	43469..43807 (+)	339	Protein_36	recombinase family protein	-
UXQ99_RS00200 (UXQ99_00200)	-	43919..44278 (-)	360	WP_001631039.1	hypothetical protein	-
UXQ99_RS00205 (UXQ99_00205)	-	44485..44811 (+)	327	WP_000391495.1	metalloregulator ArsR/SmtB family transcription factor	-
UXQ99_RS00210 (UXQ99_00210)	-	45141..47066 (+)	1926	WP_341276463.1	heavy metal translocating P-type ATPase	-

Sequence

Protein

• Length: 453 a.a.
• Molecular weight: 53316.45 Da
• Isoelectric Point: 9.8596

>NTDB_id=973545 UXQ99_RS00185 WP_001631036.1 41283..42644(-) (ccrA) [Staphylococcus aureus strain BSN182]
MEEAIAYVRQSTLKQQSLATQKSLIMDTAKQYGWSNVAFYDDKKTGRHTKRSGYQKMVEIITSGKCKVLCCYRLNRLHRN
LKNAIQFFEICKKHHITIISVNDGYFDLSKEFDCFRLNILMSLAEMESNNISEQTKNGIREKAKQGKLITTHAPFGYRYR
KGCFVVQEEEAYTVKSVYRWYLQGLGYKKISQHLDSNPNLIPRKPYQVRNILLNPNYCGRVINKYGTFNDIVPPIIDIDT
FEEAQERRIHKQLNRSNSRNKLKRRIKCPYCQSTLTNLTIKKENYSLRYYVCPKNMNDAYRTCPFKSINAPELESEVLDT
CKKYFEEQSFHKRLNNTILKVLKQQQMKHKETHLTQEQLIEKLAQNRIDVKTFKRLSASCKSEENYSTYSTYQIDDKLKY
VIKNKITLQDIAPFIDCIKITQTKQLQGIYFKNSPLNIVEQSHLITPERNEVI

Nucleotide

• Length: 1362 bp

>NTDB_id=973545 UXQ99_RS00185 WP_001631036.1 41283..42644(-) (ccrA) [Staphylococcus aureus strain BSN182]
ATGGAAGAAGCGATTGCTTATGTACGTCAAAGTACACTCAAACAACAAAGCTTAGCTACTCAAAAATCGCTCATTATGGA
TACCGCTAAGCAATATGGATGGTCTAATGTGGCGTTTTATGATGATAAGAAAACAGGTCGACATACAAAACGTTCAGGTT
ATCAAAAAATGGTAGAAATAATTACGTCTGGAAAATGTAAAGTATTGTGTTGCTATCGCTTGAACCGACTACATCGTAAT
TTGAAAAATGCCATACAATTCTTTGAAATTTGTAAAAAGCATCACATCACAATCATCAGTGTTAACGATGGATATTTTGA
TTTGTCTAAAGAGTTTGATTGCTTTCGTTTGAACATACTTATGAGTCTAGCGGAAATGGAATCAAACAATATCAGCGAAC
AAACAAAAAATGGGATTAGAGAAAAAGCCAAACAAGGTAAGCTAATCACAACTCATGCTCCGTTTGGCTATCGTTATAGA
AAAGGTTGTTTTGTTGTACAAGAAGAAGAAGCGTATACAGTTAAATCGGTTTATCGCTGGTACTTACAAGGTCTAGGCTA
CAAAAAGATTTCCCAACATTTGGATAGTAATCCTAACCTTATTCCTCGTAAGCCCTATCAAGTTAGAAATATTCTCTTGA
ACCCTAACTATTGCGGTCGTGTCATCAATAAATATGGCACGTTTAATGATATCGTTCCACCTATTATTGATATTGATACA
TTTGAAGAAGCACAAGAGCGTCGTATTCATAAACAACTCAATCGATCCAATTCTAGAAATAAGCTAAAGCGACGAATCAA
ATGTCCTTACTGTCAATCAACATTAACAAACTTAACGATAAAAAAAGAGAACTATTCTCTACGTTACTATGTTTGTCCTA
AAAATATGAATGACGCTTATCGTACATGCCCATTTAAAAGTATCAATGCACCAGAACTTGAAAGTGAAGTGCTCGACACT
TGTAAAAAGTATTTTGAAGAACAATCGTTTCATAAACGATTGAATAACACAATACTCAAAGTCCTAAAACAGCAACAAAT
GAAGCATAAAGAAACCCATCTAACACAAGAACAACTTATCGAAAAGCTAGCTCAAAATCGTATTGATGTAAAAACGTTCA
AACGTTTATCTGCTAGTTGTAAAAGTGAAGAGAATTACTCTACTTATTCAACCTACCAAATCGATGACAAATTAAAATAT
GTCATAAAAAATAAAATAACTTTACAGGATATAGCACCTTTTATCGATTGCATCAAAATAACTCAAACTAAACAATTACA
AGGAATCTACTTTAAAAACAGTCCACTCAATATCGTTGAACAATCACATTTAATAACTCCTGAAAGGAATGAAGTAATAT
GA

Domains

Predicted by InterproScan.

• Resolvase, N terminal domain (Resolvase) (4-147)

• Recombinase (Recombinase) (168-248)

• Recombinase zinc beta ribbon domain (Zn_ribbon_recom) (262-322)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccrA	Staphylococcus aureus COL	54.628	97.792	0.534
ccrA	Staphylococcus aureus N315	50.564	97.792	0.494