Detailed information
Bioinformatically predicted
Overview
| Name | recF | Type | Machinery gene |
| Locus tag | ABWW34_RS00590 | Genome accession | NZ_AP031323 |
| Coordinates | 109357..110388 (-) | Length | 343 a.a. |
| NCBI ID | WP_353300422.1 | Uniprot ID | - |
| Organism | Thermus thermophilus strain TF19 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 104357..115388
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABWW34_RS00565 (TthTF19_01100) | pilD | 105317..106387 (+) | 1071 | WP_353300418.1 | prepilin peptidase | Machinery gene |
| ABWW34_RS00570 (TthTF19_01110) | - | 106425..106928 (+) | 504 | WP_011227820.1 | DUF2939 domain-containing protein | - |
| ABWW34_RS00575 (TthTF19_01120) | - | 106942..107862 (+) | 921 | WP_353300419.1 | nitroreductase family protein | - |
| ABWW34_RS00580 (TthTF19_01130) | - | 107816..108613 (-) | 798 | WP_353300420.1 | LysM peptidoglycan-binding domain-containing protein | - |
| ABWW34_RS00585 (TthTF19_01140) | - | 108614..109372 (-) | 759 | WP_353300421.1 | DUF721 domain-containing protein | - |
| ABWW34_RS00590 (TthTF19_01150) | recF | 109357..110388 (-) | 1032 | WP_353300422.1 | DNA replication and repair protein RecF | Machinery gene |
| ABWW34_RS00595 (TthTF19_01160) | - | 110388..111560 (-) | 1173 | WP_353300423.1 | MFS transporter | - |
| ABWW34_RS00600 (TthTF19_01170) | pstB | 111570..112325 (-) | 756 | WP_353300916.1 | phosphate ABC transporter ATP-binding protein PstB | - |
| ABWW34_RS00605 (TthTF19_01180) | pstA | 112353..113198 (-) | 846 | WP_353300424.1 | phosphate ABC transporter permease PstA | - |
| ABWW34_RS00610 (TthTF19_01190) | pstC | 113195..114142 (-) | 948 | WP_353300425.1 | phosphate ABC transporter permease subunit PstC | - |
| ABWW34_RS00615 (TthTF19_01200) | pstS | 114207..115283 (-) | 1077 | WP_353300426.1 | phosphate ABC transporter substrate-binding protein PstS | - |
Sequence
Protein
Download Length: 343 a.a. Molecular weight: 37660.47 Da Isoelectric Point: 7.9871
>NTDB_id=97354 ABWW34_RS00590 WP_353300422.1 109357..110388(-) (recF) [Thermus thermophilus strain TF19]
MRLLLFRQRNFRNLALEAYRPPPGLSALVGANAQGKTSLLLGIHLALGGEVPLGLADLVRFGEEEAWLHAEVETELGAYR
LEHRLGPGGREVLLNGKRVSLRALWELPGSVLVSPLDLEAVLGPKEERRAYLDRLIARFSRRYAALLSAYEKALRQRNAL
LKAGGEGLSAWDRELARYGDEIVALRRRFLRRFAPILGEVHAALAAKEAGLRLEETAGEGVLRALEASRAEERERGQTLV
GPHRDDLVFLLEGRPAHRFASRGEAKTLALALRLAEHRLLGEHHGEPPLLLVDEWGEELDEARRRAVLAYAEALPQAILA
GLEAPPGVPVCSVVRGVVLCPGA
MRLLLFRQRNFRNLALEAYRPPPGLSALVGANAQGKTSLLLGIHLALGGEVPLGLADLVRFGEEEAWLHAEVETELGAYR
LEHRLGPGGREVLLNGKRVSLRALWELPGSVLVSPLDLEAVLGPKEERRAYLDRLIARFSRRYAALLSAYEKALRQRNAL
LKAGGEGLSAWDRELARYGDEIVALRRRFLRRFAPILGEVHAALAAKEAGLRLEETAGEGVLRALEASRAEERERGQTLV
GPHRDDLVFLLEGRPAHRFASRGEAKTLALALRLAEHRLLGEHHGEPPLLLVDEWGEELDEARRRAVLAYAEALPQAILA
GLEAPPGVPVCSVVRGVVLCPGA
Nucleotide
Download Length: 1032 bp
>NTDB_id=97354 ABWW34_RS00590 WP_353300422.1 109357..110388(-) (recF) [Thermus thermophilus strain TF19]
ATGCGGTTGCTCCTCTTCCGGCAGCGGAACTTTCGCAACCTGGCCCTGGAGGCCTACCGCCCCCCGCCGGGCCTTTCCGC
CCTGGTGGGGGCCAACGCCCAGGGGAAGACGAGCCTCCTCCTGGGGATCCACCTGGCCCTAGGGGGGGAGGTCCCCCTGG
GCCTTGCCGACCTCGTCCGCTTCGGGGAGGAGGAGGCCTGGCTCCACGCCGAGGTGGAGACGGAGCTCGGGGCCTACCGC
CTGGAGCACCGCCTGGGCCCCGGGGGGCGGGAGGTCCTCCTCAACGGGAAGCGGGTGAGCCTTCGGGCCCTTTGGGAGCT
TCCCGGCTCGGTCCTCGTCTCCCCTCTGGACCTCGAGGCGGTCCTCGGGCCCAAGGAGGAGCGGCGGGCCTACCTGGACC
GGCTCATCGCCCGCTTTTCCCGCCGCTACGCCGCCCTCCTTTCCGCCTACGAGAAGGCGCTGCGCCAGCGGAACGCCCTC
CTCAAGGCCGGGGGGGAGGGTCTTTCCGCCTGGGACCGGGAGCTCGCCCGCTACGGGGACGAGATCGTGGCCCTGAGGCG
CCGCTTCCTCCGGCGCTTCGCCCCCATCCTGGGGGAGGTCCACGCCGCCCTCGCCGCCAAGGAGGCGGGGCTTCGCTTGG
AGGAGACCGCGGGGGAAGGGGTGCTCCGGGCCCTCGAGGCCAGCCGGGCCGAGGAGCGGGAGCGGGGCCAGACCCTGGTG
GGGCCCCACCGGGACGACCTGGTCTTCCTCCTGGAGGGGCGGCCCGCCCACCGGTTCGCCAGCCGCGGGGAGGCCAAGAC
CCTGGCCCTGGCCCTGCGCCTCGCCGAGCACCGCCTCCTCGGCGAGCACCACGGCGAGCCCCCCCTCCTCCTCGTGGACG
AGTGGGGGGAGGAGCTGGACGAGGCCCGCAGGCGGGCCGTCCTCGCCTACGCCGAGGCCCTGCCCCAGGCCATCCTGGCG
GGGCTGGAAGCCCCCCCGGGGGTGCCGGTATGCTCGGTGGTACGAGGGGTGGTCCTGTGCCCTGGCGCCTGA
ATGCGGTTGCTCCTCTTCCGGCAGCGGAACTTTCGCAACCTGGCCCTGGAGGCCTACCGCCCCCCGCCGGGCCTTTCCGC
CCTGGTGGGGGCCAACGCCCAGGGGAAGACGAGCCTCCTCCTGGGGATCCACCTGGCCCTAGGGGGGGAGGTCCCCCTGG
GCCTTGCCGACCTCGTCCGCTTCGGGGAGGAGGAGGCCTGGCTCCACGCCGAGGTGGAGACGGAGCTCGGGGCCTACCGC
CTGGAGCACCGCCTGGGCCCCGGGGGGCGGGAGGTCCTCCTCAACGGGAAGCGGGTGAGCCTTCGGGCCCTTTGGGAGCT
TCCCGGCTCGGTCCTCGTCTCCCCTCTGGACCTCGAGGCGGTCCTCGGGCCCAAGGAGGAGCGGCGGGCCTACCTGGACC
GGCTCATCGCCCGCTTTTCCCGCCGCTACGCCGCCCTCCTTTCCGCCTACGAGAAGGCGCTGCGCCAGCGGAACGCCCTC
CTCAAGGCCGGGGGGGAGGGTCTTTCCGCCTGGGACCGGGAGCTCGCCCGCTACGGGGACGAGATCGTGGCCCTGAGGCG
CCGCTTCCTCCGGCGCTTCGCCCCCATCCTGGGGGAGGTCCACGCCGCCCTCGCCGCCAAGGAGGCGGGGCTTCGCTTGG
AGGAGACCGCGGGGGAAGGGGTGCTCCGGGCCCTCGAGGCCAGCCGGGCCGAGGAGCGGGAGCGGGGCCAGACCCTGGTG
GGGCCCCACCGGGACGACCTGGTCTTCCTCCTGGAGGGGCGGCCCGCCCACCGGTTCGCCAGCCGCGGGGAGGCCAAGAC
CCTGGCCCTGGCCCTGCGCCTCGCCGAGCACCGCCTCCTCGGCGAGCACCACGGCGAGCCCCCCCTCCTCCTCGTGGACG
AGTGGGGGGAGGAGCTGGACGAGGCCCGCAGGCGGGCCGTCCTCGCCTACGCCGAGGCCCTGCCCCAGGCCATCCTGGCG
GGGCTGGAAGCCCCCCCGGGGGTGCCGGTATGCTCGGTGGTACGAGGGGTGGTCCTGTGCCCTGGCGCCTGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recF | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
41.246 |
98.251 |
0.405 |