Detailed information NTG0973463

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: WJM97_RS13060
• Genome accession: NZ_CP150886
• Coordinates: 3010520..3011662 (+)
• Length: 380 a.a.
• NCBI ID: WP_353929235.1
• Uniprot ID: -
• Organism: Okeanomitos corallinicola TIOX110
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3005520..3016662

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WJM97_RS13030 (WJM97_12970)	-	3005747..3006259 (-)	513	WP_353929230.1	TIGR02652 family protein	-
WJM97_RS13035 (WJM97_12975)	-	3006500..3007021 (+)	522	WP_353929231.1	gamma carbonic anhydrase family protein	-
WJM97_RS13040 (WJM97_12980)	-	3007014..3007172 (-)	159	WP_353929232.1	alpha/beta hydrolase	-
WJM97_RS13045 (WJM97_12985)	-	3007307..3007432 (+)	126	WP_096572282.1	photosystem II protein Y	-
WJM97_RS13050 (WJM97_12990)	-	3007532..3008833 (+)	1302	WP_353929233.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-
WJM97_RS13055 (WJM97_12995)	-	3009081..3010379 (-)	1299	WP_353929234.1	sugar ABC transporter substrate-binding protein	-
WJM97_RS13060 (WJM97_13000)	pilM	3010520..3011662 (+)	1143	WP_353929235.1	type IV pilus biogenesis protein PilM	Machinery gene
WJM97_RS13065 (WJM97_13005)	-	3011668..3012474 (+)	807	WP_353929236.1	PilN domain-containing protein	-
WJM97_RS13070 (WJM97_13010)	-	3012471..3013259 (+)	789	WP_353929237.1	pilus assembly protein PilO	-
WJM97_RS13075 (WJM97_13015)	-	3013391..3015781 (+)	2391	WP_353929238.1	AMIN domain-containing protein	-
WJM97_RS13080 (WJM97_13020)	-	3015847..3016224 (-)	378	WP_353929239.1	zinc ribbon domain-containing protein	-

Sequence

Protein

• Length: 380 a.a.
• Molecular weight: 41829.40 Da
• Isoelectric Point: 4.6831

>NTDB_id=973463 WJM97_RS13060 WP_353929235.1 3010520..3011662(+) (pilM) [Okeanomitos corallinicola TIOX110]
MVNVLNNLSNIKSLSSFSKILGKHGKGVGIELAPDRMNIVQLRKQRQGLKLESLITVPVPEGIVIDGQINDAPRMAELMQ
QTMAEHKIKASRAATCIPGRDAIVRVIPVPAELDNKELREMVLNHEAALYLPYPREEADVDYQKLGYFVDEDGIEKVQVL
LVATRKELTDTYLNTFAEAGIGVDVLEINSFALIRTIRDQLRLFGPQEAAVLVDIEFDSTEIAIIINGVPQFSRTVPIGT
YQLQAALSRAMSLPTSREMDMLMDMTIPAHPLDSGKTGLTGANPGMGPMLKILGELADELRRSIDFYINQSEGLEVAQIL
LAGMGGGLQQLDEFFTQRLGFPTTQIDPIRDLSLQVEDDKYPPVKRPGLGIVLGLGMREA

Nucleotide

• Length: 1143 bp

>NTDB_id=973463 WJM97_RS13060 WP_353929235.1 3010520..3011662(+) (pilM) [Okeanomitos corallinicola TIOX110]
GTGGTCAACGTCTTAAATAATCTTAGTAATATCAAGAGCCTCAGCAGTTTTAGTAAGATCCTTGGTAAACATGGTAAAGG
AGTGGGAATTGAACTTGCTCCAGATCGAATGAACATAGTACAACTACGTAAGCAACGCCAAGGACTAAAACTAGAATCTT
TAATTACAGTCCCAGTCCCAGAAGGGATAGTTATTGATGGTCAAATTAATGACGCTCCCAGAATGGCGGAACTAATGCAG
CAAACCATGGCTGAACACAAAATTAAAGCTTCCCGCGCTGCCACTTGTATTCCCGGTAGAGATGCCATTGTCCGTGTAAT
TCCCGTGCCAGCAGAACTGGATAATAAAGAATTGCGGGAGATGGTACTAAATCATGAAGCAGCATTGTACTTACCTTATC
CCAGAGAAGAAGCTGATGTAGATTATCAGAAATTGGGGTACTTTGTAGACGAAGATGGGATTGAAAAAGTACAAGTTCTG
TTAGTTGCCACTCGTAAAGAATTAACAGACACCTATCTTAATACTTTTGCTGAAGCAGGAATAGGAGTTGATGTTCTAGA
AATTAACAGCTTTGCCCTGATTCGGACTATTCGTGATCAATTGCGACTATTCGGACCCCAAGAAGCGGCAGTATTAGTTG
ATATAGAATTTGACAGTACAGAAATTGCCATCATCATCAATGGAGTTCCTCAATTTTCTCGTACCGTTCCCATCGGCACA
TATCAACTCCAAGCGGCTTTATCCAGAGCTATGAGTTTACCCACATCCAGAGAAATGGATATGTTAATGGATATGACAAT
TCCCGCTCATCCTCTAGATAGTGGTAAAACAGGGCTAACTGGTGCAAACCCTGGGATGGGACCGATGTTAAAAATTCTGG
GAGAATTAGCTGATGAACTACGCCGTTCCATTGATTTTTATATCAATCAAAGTGAAGGTTTAGAAGTAGCACAAATTCTC
CTAGCTGGTATGGGTGGAGGACTACAACAACTTGATGAGTTTTTTACTCAAAGATTAGGTTTTCCCACTACTCAAATAGA
TCCAATTAGGGATTTATCCTTACAAGTAGAAGATGATAAATATCCTCCAGTCAAACGTCCCGGTCTAGGAATTGTACTTG
GTTTAGGAATGCGGGAGGCATAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (295-378)

• Type IV pilus assembly protein PilM; (PilM_2) (29-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Synechocystis sp. PCC 6803	61.853	96.579	0.597