Detailed information    

insolico Bioinformatically predicted

Overview


Name   sxy/tfoX   Type   Regulator
Locus tag   OO861_RS08065 Genome accession   NZ_AP026886
Coordinates   1663110..1663736 (+) Length   208 a.a.
NCBI ID   WP_033145121.1    Uniprot ID   A0A263VSI0
Organism   Enterobacter asburiae strain KAM576     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context


Location: 1658110..1668736
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OO861_RS08045 (KAM576c_15670) - 1658510..1660270 (-) 1761 WP_182383273.1 Lon protease family protein -
  OO861_RS08050 (KAM576c_15680) matP 1660457..1660909 (+) 453 WP_032658161.1 macrodomain Ter protein MatP -
  OO861_RS08055 (KAM576c_15690) ompA 1660973..1662028 (-) 1056 WP_023311028.1 porin OmpA -
  OO861_RS08060 (KAM576c_15700) sulA 1662383..1662892 (-) 510 WP_033145120.1 SOS-induced cell division inhibitor SulA -
  OO861_RS08065 (KAM576c_15710) sxy/tfoX 1663110..1663736 (+) 627 WP_033145121.1 TfoX/Sxy family DNA transformation protein Regulator
  OO861_RS08070 (KAM576c_15720) yccS 1663693..1665855 (-) 2163 WP_033145122.1 YccS family putative transporter -
  OO861_RS08075 (KAM576c_15730) - 1665875..1666321 (-) 447 WP_023311032.1 YccF domain-containing protein -
  OO861_RS08080 (KAM576c_15740) helD 1666445..1668499 (+) 2055 WP_182383275.1 DNA helicase IV -

Sequence


Protein


Download         Length: 208 a.a.        Molecular weight: 23876.44 Da        Isoelectric Point: 9.4588

>NTDB_id=97335 OO861_RS08065 WP_033145121.1 1663110..1663736(+) (sxy/tfoX) [Enterobacter asburiae strain KAM576]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALSAARKERYQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARASWLKMRAKN
KALGIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=97335 OO861_RS08065 WP_033145121.1 1663110..1663736(+) (sxy/tfoX) [Enterobacter asburiae strain KAM576]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCCCCGTTGGGCGAGATTCATCATCGTGCGCT
GTTTGGAGGCTATACCCTGGCGGTGGATGATGCGGTTTTTGCCATGGTGTCAGACGGAGAGCTTTATCTTCGCGCCTGTG
AGGAGAGTGCGAAATACTGTGTAAAAAATGCCTCCTCTTTTTTGACGTTGATGAAGCGAGGCCGCCCTGTGCTGCTCAAC
TATTATCGTGTGGATGACGGATTATGGCAGGACAGGGAGCGGCTGCTTCAGCTCTCCTCGTTTGCGCTCAGTGCGGCAAG
AAAAGAGCGCTATCAGCGCCATCAACGAAACCGACTCAAGGATCTGCCAAACCTGACCTTTCAGCTTGAAGTCTTGCTCT
TTGAAGCTGGCATCACCAATGAGGAAACGCTGCGGGCGCTGGGTGCCAGAGCGAGCTGGCTGAAGATGCGGGCAAAAAAC
AAAGCGCTCGGTATTAAAGTTCTCTTCGCGCTGGAAGGGGCTATCGAGGGGCTGCATGAGGCGGCACTCCCGGCAGGCAT
TCGCCGGGAGCTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCACTCCTCCAGGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A263VSI0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567


Multiple sequence alignment