Detailed information NTG0973191

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: WMZ02_RS14635
• Genome accession: NZ_CP150864
• Coordinates: 3113134..3114150 (-)
• Length: 338 a.a.
• NCBI ID: WP_005496568.1
• Uniprot ID: A0A3E1IL27
• Organism: Vibrio parahaemolyticus strain NJIFDCVp7
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3108134..3119150

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WMZ02_RS14610 (WMZ02_14610)	aroK	3108994..3109512 (-)	519	WP_005381319.1	shikimate kinase AroK	-
WMZ02_RS14615 (WMZ02_14615)	pilQ	3109701..3111449 (-)	1749	WP_025442303.1	type IV pilus secretin PilQ family protein	Machinery gene
WMZ02_RS14620 (WMZ02_14620)	pilP	3111481..3111996 (-)	516	WP_346338072.1	pilus assembly protein PilP	Machinery gene
WMZ02_RS14625 (WMZ02_14625)	pilO	3111986..3112579 (-)	594	WP_005480482.1	type 4a pilus biogenesis protein PilO	Machinery gene
WMZ02_RS14630 (WMZ02_14630)	pilN	3112572..3113150 (-)	579	WP_015297396.1	PilN domain-containing protein	Machinery gene
WMZ02_RS14635 (WMZ02_14635)	pilM	3113134..3114150 (-)	1017	WP_005496568.1	type IV pilus assembly protein PilM	Machinery gene
WMZ02_RS14640 (WMZ02_14640)	-	3114293..3116863 (+)	2571	WP_346338073.1	PBP1A family penicillin-binding protein	-
WMZ02_RS14645 (WMZ02_14645)	oxyR	3116919..3117827 (-)	909	WP_140060100.1	DNA-binding transcriptional regulator OxyR	-
WMZ02_RS14650 (WMZ02_14650)	-	3117998..3118726 (+)	729	WP_346338074.1	redoxin family protein	-

Sequence

Protein

• Length: 338 a.a.
• Molecular weight: 37762.28 Da
• Isoelectric Point: 6.8323

>NTDB_id=973191 WMZ02_RS14635 WP_005496568.1 3113134..3114150(-) (pilM) [Vibrio parahaemolyticus strain NJIFDCVp7]
MDKLIVTGIDIGHNSLKAVVLKPIGDQYALLGYKEILLKEGIVAENNTINHQEIVKTLKQMKKELPFGAKRVAISVPDNS
VISKKLQIEQSLDESEIEFAVVQAFSHQSPFPVEELSLDFVRLRAEEGMRGTDSYQVFATRKDVVESRVEALQQSGLKPV
LVDVHSQSLGHIWKLAAERFPEKNKYCLLDIGSLASSFTMFTEQGELFHKEFACGTRISMGTSQEDLLSDDAQAKTEQFN
RQVVERVKRQMQLYTSINGSQNIKGIWLSGEGASTPMLAEELSHQLALECELLNPLGLFEMKVSKRKRRAADWQHFSTAA
GLAVRGIHWLGGVRAVSH

Nucleotide

• Length: 1017 bp

>NTDB_id=973191 WMZ02_RS14635 WP_005496568.1 3113134..3114150(-) (pilM) [Vibrio parahaemolyticus strain NJIFDCVp7]
ATGGATAAGCTAATCGTTACCGGCATAGATATTGGCCATAACAGCCTCAAAGCCGTAGTACTTAAACCCATTGGCGATCA
ATACGCCTTATTGGGTTACAAAGAAATATTACTTAAGGAAGGTATTGTCGCTGAAAATAACACTATAAATCATCAAGAAA
TTGTAAAGACCCTAAAGCAGATGAAAAAAGAGCTGCCTTTTGGGGCCAAGCGAGTGGCAATTTCTGTTCCAGACAACTCA
GTTATTAGCAAGAAACTGCAAATCGAACAAAGCCTTGATGAGAGCGAAATCGAGTTTGCAGTGGTACAAGCTTTTTCTCA
TCAATCTCCTTTTCCTGTGGAAGAACTGAGTTTGGATTTTGTACGCCTTCGTGCTGAAGAAGGGATGCGTGGAACGGACA
GTTATCAAGTATTCGCTACGCGCAAAGATGTGGTTGAAAGCCGAGTTGAGGCGTTACAACAGTCTGGTTTAAAGCCTGTG
TTGGTTGACGTGCACTCTCAAAGCCTAGGTCATATCTGGAAGCTTGCCGCAGAGCGTTTTCCTGAAAAAAACAAATACTG
TTTGTTAGACATCGGCTCGCTAGCGAGTTCATTCACCATGTTTACCGAGCAAGGCGAACTGTTTCATAAGGAGTTTGCGT
GCGGTACTCGTATTTCAATGGGGACGTCACAAGAAGACTTACTCTCTGATGATGCTCAAGCCAAAACGGAACAGTTCAAT
CGTCAAGTGGTTGAGCGCGTAAAACGTCAAATGCAGCTCTATACCTCGATCAACGGTTCACAAAACATCAAAGGCATTTG
GTTATCGGGCGAGGGGGCATCGACGCCAATGTTGGCAGAAGAGCTCTCGCATCAGTTGGCGTTGGAGTGCGAGTTGCTAA
ACCCACTCGGACTGTTTGAAATGAAAGTGTCGAAACGCAAGCGACGAGCGGCCGATTGGCAACATTTTTCGACAGCTGCA
GGGCTGGCGGTCCGTGGCATTCATTGGTTAGGAGGTGTGCGTGCTGTATCGCATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (8-326)

3D structure

• AlphaFold DB: A0A3E1IL27

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Vibrio campbellii strain DS40M4	85.207	100	0.852
pilM	Vibrio cholerae strain A1552	48.368	99.704	0.482