Detailed information NTG0973159

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: WMZ02_RS01330
• Genome accession: NZ_CP150864
• Coordinates: 286980..287987 (-)
• Length: 335 a.a.
• NCBI ID: WP_005481416.1
• Uniprot ID: A0A072GUT1
• Organism: Vibrio parahaemolyticus strain NJIFDCVp7
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 281980..292987

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WMZ02_RS01300 (WMZ02_01300)	zapB	282149..282391 (+)	243	WP_005481417.1	cell division protein ZapB	-
WMZ02_RS01305 (WMZ02_01305)	rraA	282496..283008 (-)	513	WP_005457192.1	ribonuclease E activity regulator RraA	-
WMZ02_RS01310 (WMZ02_01310)	-	283085..284002 (-)	918	WP_017449001.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
WMZ02_RS01315 (WMZ02_01315)	hslU	284187..285518 (-)	1332	WP_005457198.1	HslU--HslV peptidase ATPase subunit	-
WMZ02_RS01320 (WMZ02_01320)	hslV	285542..286093 (-)	552	WP_005489705.1	ATP-dependent protease subunit HslV	-
WMZ02_RS01325 (WMZ02_01325)	ftsN	286258..286803 (-)	546	WP_005481405.1	cell division protein FtsN	-
WMZ02_RS01330 (WMZ02_01330)	cytR	286980..287987 (-)	1008	WP_005481416.1	DNA-binding transcriptional regulator CytR	Regulator
WMZ02_RS01335 (WMZ02_01335)	priA	288320..290524 (-)	2205	WP_083110808.1	primosomal protein N'	-
WMZ02_RS01340 (WMZ02_01340)	rpmE	290819..291040 (+)	222	WP_005457203.1	50S ribosomal protein L31	-
WMZ02_RS01345 (WMZ02_01345)	rpsJ	291498..291809 (+)	312	WP_004410492.1	30S ribosomal protein S10	-
WMZ02_RS01350 (WMZ02_01350)	rplC	291824..292453 (+)	630	WP_005456132.1	50S ribosomal protein L3	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36835.35 Da
• Isoelectric Point: 6.4938

>NTDB_id=973159 WMZ02_RS01330 WP_005481416.1 286980..287987(-) (cytR) [Vibrio parahaemolyticus strain NJIFDCVp7]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPDTAVLCQFRQQGYQQALRRAGISKDPQYSVITEFSFDGGAKAVRKLLELPEPPTA
IFCHCDTMAIGAIQEAKRLGLRVPQDLSVVGFDDINFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDVHSGSRLLE
TKLVVRGSAAPPQRA

Nucleotide

• Length: 1008 bp

>NTDB_id=973159 WMZ02_RS01330 WP_005481416.1 286980..287987(-) (cytR) [Vibrio parahaemolyticus strain NJIFDCVp7]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCGGGAGTGTCGACAGCTACGGTATCTCGAGCATTAATGAATCCAGAAAA
AGTCTCTTCTTCAACAAGAAAAAGAGTCGAAGATGCCGTCCTTGAAGCGGGCTATTCTCCAAATTCATTAGCGCGTAATC
TACGTAGAAACGAATCAAAAACGATTGTTACCATCGTTCCTGACATCTGTGATCCTTACTTTTCTGAAATCATTCGTGGT
ATCGAAGACGCCGCAATGGAACATGGCTACCTCGTACTGCTCGGTGACAGCGGCCAGCAGAAAAAGCGTGAAAGCTCGTT
TGTGAATCTAGTGTTCACCAAACAAGCCGATGGCATGTTACTGCTTGGCACCGACCTGCCATTTGATGTCAGCAAGCCAG
AACAGAAAAACCTGCCACCAATGGTCATGGCTTGTGAGTTTGCGCCAGAGCTAGAATTACCAACCGTGCACATTGACAAC
TTAACGTCTGCTTTTGAAGCGGTCAATTACCTAACTCAGCTTGGCCATAAACGCATAGCACAAATTTCAGGGCCAGACAC
AGCGGTATTGTGCCAGTTCCGCCAGCAAGGTTATCAACAAGCCTTGCGTCGCGCGGGGATCAGTAAAGACCCACAATACA
GCGTTATCACTGAGTTTTCTTTTGACGGCGGCGCGAAAGCTGTACGTAAGTTGCTAGAACTTCCAGAGCCACCAACTGCG
ATTTTCTGCCACTGTGACACCATGGCAATCGGCGCAATCCAAGAAGCGAAACGACTCGGTCTGCGCGTTCCGCAAGATCT
GTCAGTGGTTGGTTTCGATGATATCAACTTTGCTCAATACTGCGATCCACCGTTAACAACCATTTCTCAACCTCGTTATG
AAATTGGCCGCCAAGCGATGCTTATGATGCTTGAACTCCTTAAAGGCCATGACGTTCATTCAGGTTCACGCTTACTAGAA
ACTAAGCTTGTTGTCCGTGGTAGCGCAGCGCCACCGCAACGCGCCTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A072GUT1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	100	100	1
cytR	Vibrio cholerae C6706	90.719	99.701	0.904