Detailed information NTG0973040

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: WN985_RS15385
• Genome accession: NZ_CP150849
• Coordinates: 3329250..3330404 (+)
• Length: 384 a.a.
• NCBI ID: WP_342307843.1
• Uniprot ID: -
• Organism: Burkholderia pyrrocinia strain BX1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3324250..3335404

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WN985_RS15355 (WN985_15355)	-	3324891..3325496 (+)	606	WP_096471812.1	50S ribosomal protein L25/general stress protein Ctc	-
WN985_RS15360 (WN985_15360)	pth	3325617..3326216 (+)	600	WP_096471813.1	aminoacyl-tRNA hydrolase	-
WN985_RS15365 (WN985_15365)	hisC	3326332..3327399 (+)	1068	WP_096471814.1	histidinol-phosphate transaminase	-
WN985_RS15370 (WN985_15370)	-	3327484..3327750 (-)	267	WP_034179073.1	YfhL family 4Fe-4S dicluster ferredoxin	-
WN985_RS15375 (WN985_15375)	coaD	3327810..3328307 (-)	498	WP_021163047.1	pantetheine-phosphate adenylyltransferase	-
WN985_RS15380 (WN985_15380)	rsmD	3328419..3329033 (-)	615	WP_096471815.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
WN985_RS15385 (WN985_15385)	pilA	3329250..3330404 (+)	1155	WP_342307843.1	signal recognition particle-docking protein FtsY	Machinery gene
WN985_RS15390 (WN985_15390)	maiA	3330482..3331126 (-)	645	WP_342307845.1	maleylacetoacetate isomerase	-
WN985_RS15395 (WN985_15395)	ybiB	3331321..3332295 (+)	975	WP_096471817.1	DNA-binding protein YbiB	-
WN985_RS15400 (WN985_15400)	leuA	3332676..3334325 (+)	1650	WP_342307847.1	2-isopropylmalate synthase	-
WN985_RS15405 (WN985_15405)	-	3334457..3334840 (-)	384	WP_096471819.1	nuclear transport factor 2 family protein	-

Sequence

Protein

• Length: 384 a.a.
• Molecular weight: 40990.87 Da
• Isoelectric Point: 4.8057

>NTDB_id=973040 WN985_RS15385 WP_342307843.1 3329250..3330404(+) (pilA) [Burkholderia pyrrocinia strain BX1]
MFSFFKRFKKTQEPDPAESQSADASQTDEPSDAPAVDAPPAAEVPQAPVQPAGPAVVMTVTPTNDGRDEVVETVEIVPPP
LQDASAKKSWLARLKTGLAKTGSSITGVFVNTKIDEDLYEELETALLMSDAGVDATEYLLDALREKVRTGRLTDPQQVKS
ALHDLLVELLKPLEKSLMLGRAQPLVMMITGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAVWGERNNV
TVVQQESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVISKAHDGSPHEVLLVIDANTGQNALTQ
VKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAVEFADALLG

Nucleotide

• Length: 1155 bp

>NTDB_id=973040 WN985_RS15385 WP_342307843.1 3329250..3330404(+) (pilA) [Burkholderia pyrrocinia strain BX1]
ATGTTCAGCTTCTTCAAACGATTCAAGAAAACGCAGGAGCCCGATCCCGCGGAATCGCAATCGGCCGATGCGTCGCAAAC
GGACGAGCCGTCCGATGCGCCCGCGGTCGACGCTCCGCCCGCGGCCGAAGTGCCGCAGGCGCCCGTGCAACCGGCCGGGC
CGGCCGTCGTGATGACGGTCACGCCGACCAACGACGGCCGCGACGAAGTCGTCGAGACGGTCGAGATCGTCCCGCCGCCG
CTGCAGGACGCATCCGCGAAGAAATCGTGGCTTGCGCGCCTGAAAACGGGGCTCGCGAAAACCGGCTCCAGCATCACCGG
CGTATTCGTCAACACGAAGATCGACGAGGATCTGTACGAGGAGCTCGAAACGGCGCTGCTGATGTCCGACGCGGGCGTCG
ACGCGACCGAGTACCTGCTCGATGCGCTGCGCGAAAAGGTGCGCACGGGCCGGCTGACCGACCCGCAGCAGGTGAAGAGT
GCGCTGCACGACCTGCTCGTCGAGCTGTTGAAGCCGCTCGAGAAATCGCTGATGCTCGGCCGCGCGCAGCCGCTCGTGAT
GATGATCACCGGCGTGAACGGCGCGGGCAAGACGACCAGCATCGGCAAGCTCGCGAAGCATCTGCAGAGCTTCGACCAGT
CGGTGCTGCTGGCCGCGGGCGACACGTTCCGCGCGGCCGCGCGCGAACAGCTGGCAGTCTGGGGCGAGCGCAACAACGTG
ACGGTCGTGCAGCAGGAAAGCGGCGATCCGGCCGCGGTGATCTTCGACGCGGTCAGCGCCGCGCGCGCGCGCAAGATCGA
CGTGATGATGGCCGACACGGCCGGCCGCCTGCCGACGCAGCTCCACCTGATGGAAGAGCTGAAGAAGGTGAAGCGCGTGA
TCTCGAAGGCGCACGACGGCTCGCCGCACGAAGTGCTGCTGGTGATCGACGCGAACACCGGCCAGAACGCGCTCACGCAG
GTGAAGGCATTCGACGACGCGCTCGGCCTCACGGGCCTCATCGTCACGAAGCTCGACGGCACCGCGAAGGGCGGGATTCT
CGCCGCGATCGCGCGGCAACGCCCGGTGCCGGTCTACTTCATCGGCGTCGGCGAGAAGGTCGAGGACCTGCAGCCGTTCA
GCGCCGTGGAATTCGCGGACGCGCTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (185-384)

• SRP54-type protein, helical bundle domain (SRP54_N) (102-164)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.846	100	0.583