Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   AAAF57_RS01915 Genome accession   NZ_CP150847
Coordinates   361371..362447 (+) Length   358 a.a.
NCBI ID   WP_288562432.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS5     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 356371..367447
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAAF57_RS01885 (AAAF57_01885) - 357265..358011 (+) 747 WP_096832659.1 amino acid ABC transporter permease -
  AAAF57_RS01890 (AAAF57_01890) - 358011..358754 (+) 744 WP_048674802.1 amino acid ABC transporter ATP-binding protein -
  AAAF57_RS01895 (AAAF57_01895) - 358966..359190 (+) 225 WP_002884393.1 DUF4059 family protein -
  AAAF57_RS01900 (AAAF57_01900) trxB 359256..360176 (+) 921 WP_002884706.1 thioredoxin-disulfide reductase -
  AAAF57_RS01905 (AAAF57_01905) rsmD 360324..360863 (+) 540 WP_410536833.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  AAAF57_RS01910 (AAAF57_01910) coaD 360896..361393 (+) 498 WP_410536835.1 pantetheine-phosphate adenylyltransferase -
  AAAF57_RS01915 (AAAF57_01915) sepM 361371..362447 (+) 1077 WP_288562432.1 SepM family pheromone-processing serine protease Regulator
  AAAF57_RS01920 (AAAF57_01920) - 362533..363477 (+) 945 WP_004183328.1 TIGR01212 family radical SAM protein -
  AAAF57_RS01925 (AAAF57_01925) - 363474..364022 (+) 549 WP_014634968.1 tRNA (mnm(5)s(2)U34)-methyltransferase -
  AAAF57_RS01930 (AAAF57_01930) - 364019..364261 (+) 243 WP_014634967.1 hypothetical protein -
  AAAF57_RS01935 (AAAF57_01935) - 364270..366336 (+) 2067 WP_048790211.1 cation:proton antiporter -
  AAAF57_RS01940 (AAAF57_01940) - 366520..367302 (-) 783 WP_014634965.1 ABC transporter ATP-binding protein -

Sequence


Protein


Download         Length: 358 a.a.        Molecular weight: 38974.64 Da        Isoelectric Point: 9.2472

>NTDB_id=972947 AAAF57_RS01915 WP_288562432.1 361371..362447(+) (sepM) [Streptococcus salivarius strain KSS5]
MANKNESKSLLGKLWRIKWWLLSIFTVLFLLFALFFPLNNYYVELPGGAFDTKEVLTVDKKADDSKGSYNFVAVAQTKAT
LALMLYAQLNDFAKLQTAEEATGNYSDEDFMRINQFYMETSQNQAIYQGLTLAGKEASLEYMGVYVLQVADDSSFKGVLN
IADTVTAVNGKSFDNSADLIKYVQGLKLGSKVKVTYTTDDKEKTATGKIIKIANGKNGIGIGLTDHTEVKSPENVKFKLD
GVGGPSAGLMFTLAIYDQVSGQDLKAGRKIAGTGTIEKDGSVGDIGGAYLKVKSAADSGADIFFVPNNPVTKEMKKADPD
AKTNYQEAKEAAKKLGTKMKIVPVKTAQEAIDYLKKTK

Nucleotide


Download         Length: 1077 bp        

>NTDB_id=972947 AAAF57_RS01915 WP_288562432.1 361371..362447(+) (sepM) [Streptococcus salivarius strain KSS5]
GTGGCAAACAAGAACGAATCTAAATCACTATTAGGGAAACTTTGGCGGATTAAGTGGTGGTTGTTAAGTATTTTTACGGT
ACTTTTCCTCCTATTTGCCCTCTTTTTTCCGCTAAATAATTATTATGTTGAGCTTCCGGGTGGTGCTTTTGATACTAAGG
AAGTCTTGACTGTAGATAAGAAAGCTGATGATTCAAAAGGATCCTACAATTTTGTGGCGGTGGCCCAAACCAAGGCGACT
TTGGCCTTGATGCTCTATGCTCAGCTTAATGATTTTGCAAAGCTTCAAACAGCTGAAGAGGCAACTGGAAATTACTCTGA
TGAAGATTTCATGCGTATCAACCAATTTTACATGGAGACTTCCCAAAACCAAGCGATTTATCAGGGCTTGACTCTGGCTG
GTAAGGAGGCTAGCTTGGAGTATATGGGTGTTTATGTGCTTCAGGTGGCTGATGATTCTAGCTTCAAGGGTGTCCTTAAT
ATTGCGGATACGGTGACAGCTGTCAATGGCAAGTCTTTTGATAACTCTGCTGATTTGATAAAATACGTTCAAGGTCTTAA
GCTGGGTTCAAAAGTCAAGGTCACTTATACGACAGATGACAAAGAAAAGACTGCTACTGGTAAGATTATCAAGATTGCCA
ATGGTAAAAATGGTATTGGTATCGGTTTGACAGATCATACCGAGGTCAAGAGTCCTGAAAATGTGAAGTTTAAACTTGAT
GGTGTTGGTGGACCAAGTGCGGGTCTTATGTTTACCCTAGCTATTTACGATCAGGTGTCTGGTCAAGATCTCAAGGCTGG
TCGTAAGATTGCTGGAACAGGAACCATTGAAAAGGATGGTTCTGTCGGTGATATCGGTGGTGCCTACCTTAAGGTGAAAT
CAGCGGCTGATAGTGGTGCAGACATTTTCTTTGTACCAAATAATCCAGTAACCAAGGAAATGAAAAAGGCTGATCCGGAT
GCCAAGACTAACTATCAAGAGGCCAAGGAAGCTGCTAAGAAACTGGGAACCAAGATGAAAATCGTCCCTGTTAAAACAGC
TCAAGAAGCTATTGATTATTTGAAAAAGACTAAATAA

Domains


Predicted by InterproScan.

(142-206)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

65.103

95.251

0.62


Multiple sequence alignment