Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   WOC14_RS23860 Genome accession   NZ_CP150846
Coordinates   5227330..5227731 (-) Length   133 a.a.
NCBI ID   WP_003257770.1    Uniprot ID   A0AAI8FHY9
Organism   Pseudomonas asiatica strain CJ23     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5222330..5232731
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WOC14_RS23845 - 5224300..5226354 (-) 2055 WP_137137745.1 methyl-accepting chemotaxis protein -
  WOC14_RS23850 - 5226366..5226920 (-) 555 WP_003257767.1 chemotaxis protein CheW -
  WOC14_RS23855 pilH 5226917..5227282 (-) 366 WP_003257768.1 twitching motility response regulator PilH -
  WOC14_RS23860 pilG 5227330..5227731 (-) 402 WP_003257770.1 PleD family two-component system response regulator Regulator
  WOC14_RS23865 gshB 5227944..5228897 (+) 954 WP_015272080.1 glutathione synthase -
  WOC14_RS23870 - 5228989..5229894 (+) 906 WP_013974528.1 energy transducer TonB -
  WOC14_RS23875 - 5230073..5230642 (+) 570 WP_015272081.1 YqgE/AlgH family protein -
  WOC14_RS23880 ruvX 5230642..5231079 (+) 438 WP_013974530.1 Holliday junction resolvase RuvX -
  WOC14_RS23885 pyrR 5231129..5231647 (+) 519 WP_015272082.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  WOC14_RS23890 - 5231660..5232664 (+) 1005 WP_003257774.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14576.82 Da        Isoelectric Point: 6.4772

>NTDB_id=972923 WOC14_RS23860 WP_003257770.1 5227330..5227731(-) (pilG) [Pseudomonas asiatica strain CJ23]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALAKIVDHQPSIIFVDVLMPRLDGYQTCAVIKHNSAFKDTP
VILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRAHVPGFAAAQQHAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=972923 WOC14_RS23860 WP_003257770.1 5227330..5227731(-) (pilG) [Pseudomonas asiatica strain CJ23]
ATGGAACAACCCCTGAAGGTGATGGTGATCGACGACTCGCGCACGATCCGCCGCACCGCACAGATGTTGCTCGGTGAAGC
GGGCTGCGAGGTGATCACCGCCAGCGATGGCTTCGATGCCCTGGCCAAGATCGTCGACCACCAGCCCAGCATCATCTTCG
TCGATGTGTTGATGCCGCGCCTGGACGGCTACCAGACCTGCGCGGTGATCAAGCACAACAGTGCCTTCAAGGACACCCCG
GTCATTCTGCTGTCGTCACGTGACGGCCTGTTCGACAAGGCCCGCGGCCGGGTGGTCGGCTCCGACCAGTTCCTGACCAA
ACCGTTCAGCAAGGAAGAACTGCTCGACGCGATCCGCGCCCACGTGCCCGGTTTTGCCGCAGCCCAACAACACGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70

90.226

0.632

Multiple sequence alignment