Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ACL6EQ_RS20035 Genome accession   NZ_CP178716
Coordinates   3891628..3892422 (-) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis strain SY1483     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3886628..3897422
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACL6EQ_RS20010 (ACL6EQ_20010) - 3887745..3888428 (-) 684 WP_024573086.1 response regulator transcription factor -
  ACL6EQ_RS20015 (ACL6EQ_20015) - 3888640..3889539 (+) 900 WP_305090783.1 PepSY domain-containing protein -
  ACL6EQ_RS20020 (ACL6EQ_20020) - 3889700..3890200 (+) 501 WP_144484384.1 PepSY domain-containing protein -
  ACL6EQ_RS20025 (ACL6EQ_20025) - 3890197..3890323 (-) 127 Protein_3916 hypothetical protein -
  ACL6EQ_RS20030 (ACL6EQ_20030) htrA 3890344..3891546 (-) 1203 WP_015250812.1 serine protease HtrC Regulator
  ACL6EQ_RS20035 (ACL6EQ_20035) vicX 3891628..3892422 (-) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  ACL6EQ_RS20040 (ACL6EQ_20040) walI 3892444..3893286 (-) 843 WP_003244037.1 WalRK two-component regulatory system regulator WalI -
  ACL6EQ_RS20045 (ACL6EQ_20045) walH 3893273..3894640 (-) 1368 WP_069323080.1 WalRK two-component regulatory system regulator WalH -
  ACL6EQ_RS20050 (ACL6EQ_20050) walK 3894630..3896465 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  ACL6EQ_RS20055 (ACL6EQ_20055) walR 3896473..3897180 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=972913 ACL6EQ_RS20035 WP_003226939.1 3891628..3892422(-) (vicX) [Bacillus subtilis strain SY1483]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=972913 ACL6EQ_RS20035 WP_003226939.1 3891628..3892422(-) (vicX) [Bacillus subtilis strain SY1483]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGGAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AACGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCGATGGAGAC
GGTAAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTCTCCCACGATGCGGCGGAACCGATGTTTTATGTGTTCC
ATTATAACGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGAATGAAAGGCATTATCCGTTCAGCG
AATGTGTTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACTGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53