Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ACL6EQ_RS17050 Genome accession   NZ_CP178716
Coordinates   3292634..3293347 (-) Length   237 a.a.
NCBI ID   WP_015384738.1    Uniprot ID   -
Organism   Bacillus subtilis strain SY1483     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3287634..3298347
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACL6EQ_RS17030 (ACL6EQ_17030) ghrB 3287778..3288755 (+) 978 WP_015251153.1 2-hydroxyacid dehydrogenase -
  ACL6EQ_RS17035 (ACL6EQ_17035) psdB 3288793..3290733 (-) 1941 WP_024571588.1 lantibiotic ABC transporter permease PsdB -
  ACL6EQ_RS17040 (ACL6EQ_17040) psdA 3290708..3291487 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  ACL6EQ_RS17045 (ACL6EQ_17045) psdS 3291570..3292640 (-) 1071 WP_086344360.1 two-component sensor histidine kinase PsdS -
  ACL6EQ_RS17050 (ACL6EQ_17050) braR 3292634..3293347 (-) 714 WP_015384738.1 two-component system response regulator PsdR Regulator
  ACL6EQ_RS17055 (ACL6EQ_17055) - 3293494..3293703 (+) 210 WP_029318346.1 hypothetical protein -
  ACL6EQ_RS17060 (ACL6EQ_17060) yvcN 3293737..3294501 (-) 765 WP_086344361.1 arylamine N-acetyltransferase family protein -
  ACL6EQ_RS17065 (ACL6EQ_17065) crh 3294502..3294759 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  ACL6EQ_RS17070 (ACL6EQ_17070) whiA 3294783..3295733 (-) 951 WP_003243775.1 DNA-binding protein WhiA -
  ACL6EQ_RS17075 (ACL6EQ_17075) mgfK 3295756..3296709 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  ACL6EQ_RS17080 (ACL6EQ_17080) rapZ 3296711..3297598 (-) 888 WP_003243903.1 RNase adapter RapZ -
  ACL6EQ_RS17085 (ACL6EQ_17085) rppI 3297623..3298099 (-) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27529.40 Da        Isoelectric Point: 4.6774

>NTDB_id=972896 ACL6EQ_RS17050 WP_015384738.1 3292634..3293347(-) (braR) [Bacillus subtilis strain SY1483]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSSRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLKDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=972896 ACL6EQ_RS17050 WP_015384738.1 3292634..3293347(-) (braR) [Bacillus subtilis strain SY1483]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTTCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGTGGGCTGACGATTTATCCTGATCAAAATGAGGCCGAATGGAACAGCTCCCGTATTCTGTTTTCCCAAAAA
GAATTTCAGCTTCTCTCTATTTTTGTGAGGGAGCATAAAAAAATTGTTTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCCGGACTGA
AAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-112)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43

Multiple sequence alignment