Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ACL6EQ_RS14670 Genome accession   NZ_CP178716
Coordinates   2837676..2838371 (-) Length   231 a.a.
NCBI ID   WP_017695455.1    Uniprot ID   -
Organism   Bacillus subtilis strain SY1483     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2832676..2843371
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACL6EQ_RS14650 (ACL6EQ_14650) yttA 2833103..2833849 (+) 747 WP_003229141.1 LMBR1 domain-containing protein -
  ACL6EQ_RS14655 (ACL6EQ_14655) bceB 2833886..2835826 (-) 1941 WP_328206577.1 bacitracin ABC transporter permease BceB -
  ACL6EQ_RS14660 (ACL6EQ_14660) bceA 2835816..2836577 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  ACL6EQ_RS14665 (ACL6EQ_14665) bceS 2836679..2837683 (-) 1005 WP_015384427.1 two-component sensor histidine kinase BceS -
  ACL6EQ_RS14670 (ACL6EQ_14670) braR 2837676..2838371 (-) 696 WP_017695455.1 two-component response regulator BceR Regulator
  ACL6EQ_RS14675 (ACL6EQ_14675) ytrF 2838468..2839778 (-) 1311 WP_041337710.1 ABC transporter permease YtrF -
  ACL6EQ_RS14680 (ACL6EQ_14680) ytrE 2839768..2840463 (-) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  ACL6EQ_RS14685 (ACL6EQ_14685) ytrD 2840478..2841455 (-) 978 WP_041337712.1 ABC transporter permease YtrD -
  ACL6EQ_RS14690 (ACL6EQ_14690) ytrC 2841469..2842455 (-) 987 WP_413358803.1 ABC transporter permease YtrC -
  ACL6EQ_RS14695 (ACL6EQ_14695) ytrB 2842449..2843327 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26907.80 Da        Isoelectric Point: 5.3775

>NTDB_id=972886 ACL6EQ_RS14670 WP_017695455.1 2837676..2838371(-) (braR) [Bacillus subtilis strain SY1483]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFEVLIAKIQAMFRRVHHYNTEPNTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=972886 ACL6EQ_RS14670 WP_017695455.1 2837676..2838371(-) (braR) [Bacillus subtilis strain SY1483]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCACTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGTTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGAAGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAATACGATTAAAACGTGGTGTG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGCGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTTTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377