Detailed information NTG0972778

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ACL6EQ_RS00735
• Genome accession: NZ_CP178716
• Coordinates: 142612..143733 (+)
• Length: 373 a.a.
• NCBI ID: WP_003234740.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SY1483
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 137612..148733

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACL6EQ_RS00710 (ACL6EQ_00710)	ycdA	137617..138681 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
ACL6EQ_RS00715 (ACL6EQ_00715)	-	138704..138835 (-)	132	WP_003246334.1	hypothetical protein	-
ACL6EQ_RS00720 (ACL6EQ_00720)	ycdB	139009..140430 (+)	1422	WP_413359725.1	YcdB/YcdC domain-containing protein	-
ACL6EQ_RS00725 (ACL6EQ_00725)	ycdC	140617..141978 (+)	1362	WP_413359728.1	YcdB/YcdC domain-containing protein	-
ACL6EQ_RS00730 (ACL6EQ_00730)	cwlK	141986..142489 (-)	504	WP_042977282.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
ACL6EQ_RS00735 (ACL6EQ_00735)	rapF	142612..143733 (+)	1122	WP_003234740.1	response regulator aspartate phosphatase RapJ	Regulator
ACL6EQ_RS00740 (ACL6EQ_00740)	ycdF	143841..144617 (+)	777	WP_003234739.1	SDR family oxidoreductase	-
ACL6EQ_RS00745 (ACL6EQ_00745)	ycdG	144642..146327 (+)	1686	WP_413359733.1	glycoside hydrolase family 13 protein	-
ACL6EQ_RS00750 (ACL6EQ_00750)	znuA	146514..147473 (+)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
ACL6EQ_RS00755 (ACL6EQ_00755)	znuC	147528..148223 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44427.31 Da
• Isoelectric Point: 4.8344

>NTDB_id=972778 ACL6EQ_RS00735 WP_003234740.1 142612..143733(+) (rapF) [Bacillus subtilis strain SY1483]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGNGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=972778 ACL6EQ_RS00735 WP_003234740.1 142612..143733(+) (rapF) [Bacillus subtilis strain SY1483]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCATTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATATTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCAATTGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCATACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGGAAATACGACAAAGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGATATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAACGGTGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCAGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405