Detailed information NTG0972765

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACL60T_RS24900
• Genome accession: NZ_CP178659
• Coordinates: 4871059..4872084 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain VTB96933v
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4866059..4877084

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACL60T_RS24880 (ACL60T_24845)	metJ	4867244..4867561 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ACL60T_RS24885 (ACL60T_24850)	yiiX	4867621..4868229 (+)	609	WP_000702310.1	YiiX family permuted papain-like enzyme	-
ACL60T_RS24890 (ACL60T_24855)	rpmE	4868290..4868502 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACL60T_RS24895 (ACL60T_24860)	priA	4868705..4870903 (+)	2199	WP_001469197.1	primosomal protein N'	Machinery gene
ACL60T_RS24900 (ACL60T_24865)	cytR	4871059..4872084 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACL60T_RS24905 (ACL60T_24870)	ftsN	4872176..4873135 (+)	960	WP_000068834.1	cell division protein FtsN	-
ACL60T_RS24910 (ACL60T_24875)	hslV	4873228..4873758 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACL60T_RS24915 (ACL60T_24880)	hslU	4873768..4875099 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ACL60T_RS24920 (ACL60T_24885)	menA	4875166..4876092 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACL60T_RS24925 (ACL60T_24890)	rraA	4876185..4876670 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=972765 ACL60T_RS24900 WP_000644904.1 4871059..4872084(+) (cytR) [Escherichia coli strain VTB96933v]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=972765 ACL60T_RS24900 WP_000644904.1 4871059..4872084(+) (cytR) [Escherichia coli strain VTB96933v]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTACCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628