Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   WNC56_RS05860 Genome accession   NZ_CP150833
Coordinates   1186340..1186519 (+) Length   59 a.a.
NCBI ID   WP_406846101.1    Uniprot ID   -
Organism   Bacillus safensis strain DMB13     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1181340..1191519
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WNC56_RS05830 (WNC56_05825) - 1181740..1181919 (+) 180 WP_008348517.1 YjzC family protein -
  WNC56_RS05835 (WNC56_05830) - 1182083..1183348 (+) 1266 WP_034282089.1 MFS transporter -
  WNC56_RS05840 (WNC56_05835) - 1183459..1183653 (-) 195 WP_003211779.1 YjzD family protein -
  WNC56_RS05845 (WNC56_05840) - 1183866..1184606 (+) 741 WP_024425057.1 hypothetical protein -
  WNC56_RS05850 (WNC56_05845) - 1184680..1185255 (+) 576 WP_406846100.1 nad binding enzyme -
  WNC56_RS05855 (WNC56_05850) med 1185347..1186309 (+) 963 WP_024425055.1 BMP family ABC transporter substrate-binding protein Regulator
  WNC56_RS05860 (WNC56_05855) comZ 1186340..1186519 (+) 180 WP_406846101.1 ComZ family protein Regulator
  WNC56_RS05865 (WNC56_05860) - 1186530..1186763 (-) 234 WP_024425053.1 hypothetical protein -
  WNC56_RS05870 (WNC56_05865) - 1186935..1187873 (+) 939 WP_024425052.1 beta-ketoacyl-ACP synthase III -
  WNC56_RS05875 (WNC56_05870) fabF 1187895..1189136 (+) 1242 WP_024425051.1 beta-ketoacyl-ACP synthase II -
  WNC56_RS05880 (WNC56_05875) - 1189214..1190017 (+) 804 WP_406846181.1 DUF2268 domain-containing protein -
  WNC56_RS05885 (WNC56_05880) - 1190167..1191147 (+) 981 WP_406846102.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 59 a.a.        Molecular weight: 6664.61 Da        Isoelectric Point: 3.9646

>NTDB_id=972765 WNC56_RS05860 WP_406846101.1 1186340..1186519(+) (comZ) [Bacillus safensis strain DMB13]
MEFLQIAMKYFPQAKEELDKAGIQLEPEALQPLLTLFTSVMQEAYELGKADAESEKATE

Nucleotide


Download         Length: 180 bp        

>NTDB_id=972765 WNC56_RS05860 WP_406846101.1 1186340..1186519(+) (comZ) [Bacillus safensis strain DMB13]
ATGGAATTTTTACAAATTGCCATGAAGTATTTTCCGCAGGCGAAGGAAGAGTTAGATAAAGCAGGGATTCAGCTTGAGCC
TGAAGCACTTCAGCCGCTTCTAACATTATTTACATCTGTCATGCAAGAAGCATACGAGCTTGGAAAAGCAGATGCAGAAT
CAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(1-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

69.091

93.22

0.644

Multiple sequence alignment