Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ACL66B_RS15560 Genome accession   NZ_CP178617
Coordinates   2987792..2988487 (-) Length   231 a.a.
NCBI ID   WP_041851120.1    Uniprot ID   -
Organism   Bacillus subtilis strain QXKL-3     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2982792..2993487
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACL66B_RS15540 (ACL66B_15540) yttA 2983219..2983965 (+) 747 WP_014477720.1 LMBR1 domain-containing protein -
  ACL66B_RS15545 (ACL66B_15545) bceB 2984002..2985942 (-) 1941 WP_041851118.1 bacitracin ABC transporter permease BceB -
  ACL66B_RS15550 (ACL66B_15550) bceA 2985932..2986693 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  ACL66B_RS15555 (ACL66B_15555) bceS 2986795..2987799 (-) 1005 WP_041851119.1 two-component sensor histidine kinase BceS -
  ACL66B_RS15560 (ACL66B_15560) braR 2987792..2988487 (-) 696 WP_041851120.1 two-component response regulator BceR Regulator
  ACL66B_RS15565 (ACL66B_15565) ytrF 2988584..2989894 (-) 1311 WP_041851121.1 ABC transporter permease YtrF -
  ACL66B_RS15570 (ACL66B_15570) ytrE 2989884..2990579 (-) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  ACL66B_RS15575 (ACL66B_15575) ytrD 2990594..2991571 (-) 978 WP_043940179.1 ABC transporter permease YtrD -
  ACL66B_RS15580 (ACL66B_15580) ytrC 2991601..2992587 (-) 987 WP_015483589.1 ABC transporter permease YtrC -
  ACL66B_RS15585 (ACL66B_15585) ytrB 2992581..2993459 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26908.82 Da        Isoelectric Point: 5.3775

>NTDB_id=972660 ACL66B_RS15560 WP_041851120.1 2987792..2988487(-) (braR) [Bacillus subtilis strain QXKL-3]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLEVLQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=972660 ACL66B_RS15560 WP_041851120.1 2987792..2988487(-) (braR) [Bacillus subtilis strain QXKL-3]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCAGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
AGAGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATCCAAAAGCCATTTCATTTTGATGT
GCTGATTGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAGATGTTCATT
CTTAAACAACTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGAGGTCCTGCAGCTAGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(5-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377