Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACL66B_RS15375 Genome accession   NZ_CP178617
Coordinates   2946004..2946714 (-) Length   236 a.a.
NCBI ID   WP_041851103.1    Uniprot ID   -
Organism   Bacillus subtilis strain QXKL-3     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2941004..2951714
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACL66B_RS15355 (ACL66B_15355) cysK 2941056..2941991 (+) 936 WP_003229237.1 cysteine synthase A -
  ACL66B_RS15360 (ACL66B_15360) pepV 2942025..2943416 (-) 1392 WP_029318264.1 dipeptidase PepV -
  ACL66B_RS15365 (ACL66B_15365) pbuO 2943513..2944811 (+) 1299 WP_003229234.1 hypoxanthine/guanine permease PbuO -
  ACL66B_RS15370 (ACL66B_15370) ythQ 2944850..2946007 (-) 1158 WP_041851102.1 ABC transporter permease -
  ACL66B_RS15375 (ACL66B_15375) pptA 2946004..2946714 (-) 711 WP_041851103.1 ABC transporter ATP-binding protein Regulator
  ACL66B_RS15380 (ACL66B_15380) ytzE 2947004..2947225 (+) 222 WP_003152337.1 DeoR family transcriptional regulator -
  ACL66B_RS15385 (ACL66B_15385) rsuA 2947347..2948066 (-) 720 WP_014480587.1 pseudouridine synthase -
  ACL66B_RS15390 (ACL66B_15390) murJ 2948135..2949769 (-) 1635 WP_041851104.1 lipid II flippase MurJ -
  ACL66B_RS15395 (ACL66B_15395) ytfP 2949973..2951235 (+) 1263 WP_072173641.1 NAD(P)/FAD-dependent oxidoreductase -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 26575.63 Da        Isoelectric Point: 5.3508

>NTDB_id=972659 ACL66B_RS15375 WP_041851103.1 2946004..2946714(-) (pptA) [Bacillus subtilis strain QXKL-3]
MTNLLEASIEQAGYTSRNKVLTDVFLEVRKGELVGLIGANGAGKSTAIKAILGLSEDFKGHIAWNDCSFAYIPEHPSFYE
ELTLWEHLDLISTLHGIEEREFAHRAQSLLQTFSLDHVKHELPVTFSKGMQQKLMLIQAFLSKPDMYVIDEPFIGLDPIS
TKRFVDMLKAEKERGAGILMCTHVLDTAEKICDRFYMIEKGSLFLQGTLKDIQDKTGLEGQSLLDCFYKAVQGDRL

Nucleotide


Download         Length: 711 bp        

>NTDB_id=972659 ACL66B_RS15375 WP_041851103.1 2946004..2946714(-) (pptA) [Bacillus subtilis strain QXKL-3]
TTGACAAATTTGCTTGAAGCTTCAATAGAACAGGCCGGGTATACAAGCCGAAATAAAGTGCTCACCGATGTTTTTCTGGA
AGTCAGAAAAGGGGAACTAGTTGGACTGATCGGAGCTAACGGCGCCGGAAAAAGCACCGCAATCAAGGCGATACTCGGCC
TTTCAGAAGATTTTAAAGGGCATATTGCCTGGAACGACTGTTCATTTGCATATATTCCGGAGCATCCGTCCTTTTACGAA
GAACTGACGCTGTGGGAGCATTTGGATCTGATCAGCACACTCCACGGCATTGAAGAGAGAGAATTTGCGCATCGGGCCCA
AAGCCTGCTGCAGACGTTTTCGCTTGATCATGTCAAACATGAGCTACCTGTCACCTTTTCGAAGGGCATGCAGCAAAAAC
TAATGCTTATCCAGGCCTTTCTCTCTAAGCCGGATATGTATGTGATTGATGAACCGTTTATCGGCCTTGATCCGATATCG
ACGAAACGCTTTGTGGACATGCTTAAGGCTGAAAAAGAACGTGGAGCCGGAATTCTTATGTGCACGCATGTACTCGATAC
CGCGGAAAAAATCTGTGACCGGTTTTATATGATTGAGAAAGGTTCATTATTTCTCCAAGGCACGTTAAAAGATATTCAGG
ACAAGACCGGATTAGAGGGGCAGTCATTGCTTGACTGTTTTTATAAGGCAGTTCAAGGTGATCGGCTATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(21-153)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

44.017

99.153

0.436
  pptA Streptococcus thermophilus LMD-9

44.248

95.763

0.424