Detailed information NTG0972532

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACL656_RS22160
• Genome accession: NZ_CP178597
• Coordinates: 4654622..4655647 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain ZF8-1
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4649622..4660647

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACL656_RS22140 (ACL656_22140)	metJ	4650683..4651000 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ACL656_RS22145 (ACL656_22145)	yiiX	4651184..4651792 (+)	609	WP_000877400.1	YiiX family permuted papain-like enzyme	-
ACL656_RS22150 (ACL656_22150)	rpmE	4651853..4652065 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACL656_RS22155 (ACL656_22155)	priA	4652268..4654466 (+)	2199	WP_023155166.1	primosomal protein N'	Machinery gene
ACL656_RS22160 (ACL656_22160)	cytR	4654622..4655647 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACL656_RS22165 (ACL656_22165)	ftsN	4655739..4656698 (+)	960	WP_000068834.1	cell division protein FtsN	-
ACL656_RS22170 (ACL656_22170)	hslV	4656791..4657321 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACL656_RS22175 (ACL656_22175)	hslU	4657331..4658662 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ACL656_RS22180 (ACL656_22180)	menA	4658729..4659655 (+)	927	WP_001308187.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACL656_RS22185 (ACL656_22185)	rraA	4659748..4660233 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=972532 ACL656_RS22160 WP_000644904.1 4654622..4655647(+) (cytR) [Escherichia coli strain ZF8-1]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=972532 ACL656_RS22160 WP_000644904.1 4654622..4655647(+) (cytR) [Escherichia coli strain ZF8-1]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATAGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCACGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628