Detailed information NTG0972388

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACLZ0G_RS01090
• Genome accession: NZ_CP178552
• Coordinates: 220505..221530 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain WWCOL-236
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 215505..226530

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLZ0G_RS01060 (ACLZ0G_01060)	zapB	215589..215834 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ACLZ0G_RS01065 (ACLZ0G_01065)	rraA	215919..216404 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACLZ0G_RS01070 (ACLZ0G_01070)	menA	216497..217423 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACLZ0G_RS01075 (ACLZ0G_01075)	hslU	217490..218821 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ACLZ0G_RS01080 (ACLZ0G_01080)	hslV	218831..219361 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACLZ0G_RS01085 (ACLZ0G_01085)	ftsN	219454..220413 (-)	960	WP_000068834.1	cell division protein FtsN	-
ACLZ0G_RS01090 (ACLZ0G_01090)	cytR	220505..221530 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACLZ0G_RS01095 (ACLZ0G_01095)	priA	221686..223884 (-)	2199	WP_022646377.1	primosomal protein N'	Machinery gene
ACLZ0G_RS01100 (ACLZ0G_01100)	rpmE	224087..224299 (+)	213	WP_000710769.1	50S ribosomal protein L31	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=972388 ACLZ0G_RS01090 WP_000644904.1 220505..221530(-) (cytR) [Escherichia coli strain WWCOL-236]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=972388 ACLZ0G_RS01090 WP_000644904.1 220505..221530(-) (cytR) [Escherichia coli strain WWCOL-236]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACCGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGTGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628