Detailed information NTG0972285

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: ACLMBL_RS09835
• Genome accession: NZ_CP178536
• Coordinates: 1954525..1955607 (-)
• Length: 360 a.a.
• NCBI ID: WP_001793589.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain T144
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1949525..1960607

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLMBL_RS09815 (ACLMBL_09815)	-	1950134..1950238 (-)	105	WP_001790092.1	hypothetical protein	-
ACLMBL_RS09820 (ACLMBL_09820)	secA	1950280..1952811 (-)	2532	WP_000506530.1	preprotein translocase subunit SecA	-
ACLMBL_RS09825 (ACLMBL_09825)	hpf	1953225..1953797 (-)	573	WP_000617735.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
ACLMBL_RS09830 (ACLMBL_09830)	-	1953858..1954532 (-)	675	WP_001057965.1	ComF family protein	-
ACLMBL_RS09835 (ACLMBL_09835)	comFA	1954525..1955607 (-)	1083	WP_001793589.1	DEAD/DEAH box helicase	Machinery gene
ACLMBL_RS09840 (ACLMBL_09840)	fakB1	1955971..1956837 (-)	867	WP_000686342.1	fatty acid kinase binding subunit FakB1	-
ACLMBL_RS09845 (ACLMBL_09845)	-	1956981..1957622 (+)	642	WP_000192949.1	YigZ family protein	-
ACLMBL_RS09850 (ACLMBL_09850)	-	1957794..1958849 (-)	1056	WP_000258151.1	glycosyltransferase family 4 protein	-
ACLMBL_RS09855 (ACLMBL_09855)	gdpS	1959167..1960237 (+)	1071	WP_000460983.1	GGDEF domain-containing protein GdpS	-

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 42097.58 Da
• Isoelectric Point: 9.7626

>NTDB_id=972285 ACLMBL_RS09835 WP_001793589.1 1954525..1955607(-) (comFA) [Staphylococcus aureus strain T144]
MDNVTRYKITESSQSSSQAYYHLSFELSEQQSYASEHIVRAIRKRQTILLYAVTGAGKTEMMFQGIQYARIQGDNIAIVS
PRVDVVVEISKRIKDAFLNEDIDILHQQSRQQFEGHFVVCTVHQLYRFKQHFDTIFIDEVDAFPLSMDKNLQQALKSSSK
VEHATIYMTATPPKQLLSEIPHENIIKLPARFHKKSLPVPKYRYFKLNNNKIQKMLYRILQDQINNQRYTLVFFNNIETM
IKTFSVYKQKITKLTYVHSEDVFRFEKVEQLRNGHFDVIFTTTILERGFTMANLDVVVIDAHQYTQEALIQIAGRVGRKL
ECPTGKVLFFHEGVSMNMIQAKKEIQRMNKLALKRGWIDE

Nucleotide

• Length: 1083 bp

>NTDB_id=972285 ACLMBL_RS09835 WP_001793589.1 1954525..1955607(-) (comFA) [Staphylococcus aureus strain T144]
ATGGATAATGTAACAAGATATAAAATAACAGAGAGTTCGCAAAGTTCATCACAAGCATATTATCATCTCTCATTTGAATT
GTCGGAACAGCAGTCTTATGCCTCAGAACATATTGTTCGAGCCATTAGAAAGAGACAAACGATTTTGTTATATGCCGTAA
CAGGTGCAGGTAAGACAGAAATGATGTTTCAAGGCATTCAATATGCAAGAATACAGGGAGATAATATAGCTATTGTGTCA
CCACGTGTAGATGTTGTTGTAGAAATTAGTAAACGTATTAAAGACGCATTTCTTAATGAAGATATAGACATACTACACCA
GCAATCAAGACAACAATTTGAAGGGCATTTTGTTGTATGCACAGTGCATCAACTTTACCGATTCAAACAGCACTTTGATA
CTATTTTTATTGATGAAGTCGATGCCTTTCCTTTATCAATGGATAAAAATCTACAACAAGCATTGAAGTCATCTTCTAAA
GTTGAACATGCAACAATTTATATGACAGCAACACCACCGAAACAACTTCTGTCAGAGATTCCCCACGAAAATATAATTAA
ATTGCCAGCTCGCTTTCATAAAAAATCACTTCCAGTTCCTAAATATCGTTATTTCAAACTTAATAATAATAAGATTCAGA
AAATGTTATACCGAATTTTACAAGATCAAATTAATAATCAACGTTATACACTGGTGTTTTTTAACAATATAGAAACAATG
ATTAAAACATTTTCGGTTTATAAGCAGAAAATTACTAAATTAACATACGTCCATAGCGAGGATGTTTTTCGCTTTGAAAA
AGTTGAACAATTAAGGAATGGACATTTCGATGTCATTTTTACTACGACAATATTAGAACGTGGATTTACAATGGCAAATT
TGGATGTTGTTGTTATCGATGCACATCAATATACTCAAGAGGCTTTAATACAAATTGCTGGACGTGTTGGACGAAAATTA
GAATGTCCTACTGGAAAAGTATTGTTTTTTCATGAAGGAGTAAGTATGAATATGATTCAAGCTAAAAAAGAGATTCAAAG
GATGAACAAATTAGCATTAAAAAGAGGTTGGATTGATGAATAA

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (215-318)

• Type III restriction enzyme, res subunit (ResIII) (25-173)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	39.233	94.167	0.369