Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ACLZ2J_RS21185 Genome accession   NZ_CP178514
Coordinates   4039754..4040443 (-) Length   229 a.a.
NCBI ID   WP_003243527.1    Uniprot ID   P42421
Organism   Bacillus subtilis strain BS18-1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 4034754..4045443
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLZ2J_RS21165 yxeA 4035659..4036006 (-) 348 WP_003227084.1 YxeA family protein -
  ACLZ2J_RS21170 yxdM 4036020..4037888 (-) 1869 WP_413155044.1 ABC transporter permease YxdM -
  ACLZ2J_RS21175 yxdL 4037863..4038636 (-) 774 WP_003243557.1 ABC transporter ATP-binding protein YxdL -
  ACLZ2J_RS21180 yxdK 4038780..4039757 (-) 978 WP_003243885.1 two-component system sensor histidine kinase YxdK -
  ACLZ2J_RS21185 braR 4039754..4040443 (-) 690 WP_003243527.1 two-component system response regulator YxdJ Regulator
  ACLZ2J_RS21190 iolJ 4040551..4041423 (-) 873 WP_003242766.1 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase -
  ACLZ2J_RS21195 iolI 4041444..4042280 (-) 837 WP_032730291.1 2-keto-myo-inositol isomerase -
  ACLZ2J_RS21200 iolH 4042366..4043235 (-) 870 WP_015250852.1 sugar phosphate isomerase/epimerase family protein -
  ACLZ2J_RS21205 iolG 4043255..4044289 (-) 1035 WP_032730288.1 bifunctional inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 26600.34 Da        Isoelectric Point: 4.8564

>NTDB_id=972206 ACLZ2J_RS21185 WP_003243527.1 4039754..4040443(-) (braR) [Bacillus subtilis strain BS18-1]
MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFTAVLDVFLREKPDVVLLDINLPAYDGYYWCRQIRQHSTSPIIFISA
RSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQDEKSELSKKES
KLLEVLLERGEKVTSRDRLMEKTWDTDIFIDDNTLNVYITRLRKKLRELNAPVSIEAVRGEGYQLRAQS

Nucleotide


Download         Length: 690 bp        

>NTDB_id=972206 ACLZ2J_RS21185 WP_003243527.1 4039754..4040443(-) (braR) [Bacillus subtilis strain BS18-1]
TTGAATAAAATCATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATTGCAGAATTACCTTGAAAAATACGGATATCA
AACAGTGGTCGCCGCGGATTTTACAGCTGTTCTTGATGTCTTTTTGCGGGAAAAGCCCGATGTGGTGCTGCTTGATATCA
ATTTGCCGGCATATGACGGATATTATTGGTGCCGGCAGATCCGCCAGCACTCCACAAGCCCGATCATCTTTATTTCTGCC
AGAAGCGGGGAAATGGATCAGGTGATGGCGATTGAAAATGGGGGAGACGATTATATCGAAAAACCGTTTTCTTATGATAT
TGTGCTTGCGAAAATCAAAAGCCAGATCCGGAGGGCGTACGGGGAGTACGCCGCAAAGCAGGGAGAGAAAGTGGTTGAAT
ATGCCGGCGTTCAGCTCTTTGTGGAACGGTTTGAACTGCGTTTTCAGGATGAAAAAAGTGAGCTTTCTAAAAAAGAAAGC
AAGCTTTTGGAAGTGCTGCTTGAGCGGGGAGAAAAGGTGACGAGTCGGGACCGTCTCATGGAAAAGACGTGGGACACCGA
CATATTCATCGATGATAATACACTTAACGTGTATATCACGCGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTT
CTATTGAAGCGGTGCGGGGCGAAGGCTACCAGCTGAGGGCGCAGTCATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-225)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P42421

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.704

97.38

0.406