Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AACI72_RS15320 Genome accession   NZ_AP029008
Coordinates   3250019..3250486 (-) Length   155 a.a.
NCBI ID   WP_016723446.1    Uniprot ID   -
Organism   Ralstonia pseudosolanacearum strain MAFF 211521     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3245019..3255486
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AACI72_RS15305 (MAFF211521_30080) - 3246538..3248769 (-) 2232 WP_011000626.1 methyl-accepting chemotaxis protein -
  AACI72_RS15310 (MAFF211521_30090) - 3249015..3249560 (-) 546 WP_011000625.1 chemotaxis protein CheW -
  AACI72_RS15315 (MAFF211521_30100) pilH 3249619..3249987 (-) 369 WP_003269243.1 response regulator Machinery gene
  AACI72_RS15320 (MAFF211521_30110) pilG 3250019..3250486 (-) 468 WP_016723446.1 response regulator Regulator
  AACI72_RS15325 (MAFF211521_30120) - 3250777..3250959 (-) 183 WP_003261842.1 rubredoxin -
  AACI72_RS15330 (MAFF211521_30130) hemL 3251171..3252472 (+) 1302 WP_111374466.1 glutamate-1-semialdehyde 2,1-aminomutase -
  AACI72_RS15335 (MAFF211521_30140) dapA 3252575..3253489 (-) 915 WP_020831380.1 4-hydroxy-tetrahydrodipicolinate synthase -
  AACI72_RS15340 (MAFF211521_30150) - 3253870..3254496 (+) 627 WP_016723449.1 LemA family protein -
  AACI72_RS15345 (MAFF211521_30160) - 3254509..3255357 (+) 849 WP_020831378.1 YgcG family protein -

Sequence

Protein


Download         Length: 155 a.a.        Molecular weight: 16767.51 Da        Isoelectric Point: 8.2887

>NTDB_id=97214 AACI72_RS15320 WP_016723446.1 3250019..3250486(-) (pilG) [Ralstonia pseudosolanacearum strain MAFF 211521]
MVAQRENMMQSARVEQLTNSQPLASSLAGRKVLVIDDSSTIRRTAQIFLSKVDCQVVLAEDGFDALAKLGDFKPDIVFCD
ILMPKLDGYLTCSLIKKSPKFHATPVVMLSSRDGVFDRARGKLVGAVDHLAKPFSREALLEAVQAHLPAAAGAAQ

Nucleotide


Download         Length: 468 bp        

>NTDB_id=97214 AACI72_RS15320 WP_016723446.1 3250019..3250486(-) (pilG) [Ralstonia pseudosolanacearum strain MAFF 211521]
GTGGTCGCGCAACGCGAGAACATGATGCAATCCGCGCGGGTGGAACAACTGACCAATTCCCAACCGCTGGCGAGTTCGCT
TGCCGGCCGTAAAGTGCTGGTGATCGACGATTCCAGTACCATCCGCCGTACCGCGCAGATTTTCCTGTCCAAGGTCGATT
GCCAGGTCGTGCTGGCCGAAGACGGGTTCGATGCGCTGGCCAAGCTGGGTGACTTCAAGCCGGACATCGTCTTTTGCGAC
ATCCTGATGCCCAAGCTGGACGGTTACCTGACCTGCTCACTGATCAAGAAAAGCCCGAAGTTTCATGCCACGCCCGTGGT
CATGCTGTCGTCGCGCGACGGGGTGTTCGACCGCGCGCGCGGCAAGCTGGTCGGGGCGGTGGACCACCTTGCCAAGCCTT
TCTCGCGGGAAGCGCTGCTGGAGGCGGTCCAGGCGCATCTGCCGGCAGCCGCTGGCGCCGCGCAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(32-144)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

54.622

76.774

0.419

Multiple sequence alignment