Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACLZ2J_RS05470 Genome accession   NZ_CP178514
Coordinates   1054518..1055261 (+) Length   247 a.a.
NCBI ID   WP_003233230.1    Uniprot ID   G4NRP4
Organism   Bacillus subtilis strain BS18-1     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1049518..1060261
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLZ2J_RS05435 yhaI 1049846..1050187 (+) 342 WP_009966921.1 YhaI family protein -
  ACLZ2J_RS05440 scoC 1050184..1050795 (-) 612 WP_003239501.1 HTH-type transcriptional regulator Hpr -
  ACLZ2J_RS05445 yhaH 1050973..1051329 (-) 357 WP_003245875.1 YtxH domain-containing protein -
  ACLZ2J_RS05450 - 1051459..1051650 (+) 192 WP_003233238.1 hypothetical protein -
  ACLZ2J_RS05455 trpP 1051724..1052242 (-) 519 WP_003233236.1 tryptophan transporter TrpP -
  ACLZ2J_RS05460 serC 1052367..1053446 (-) 1080 WP_003233234.1 3-phosphoserine/phosphohydroxythreonine transaminase -
  ACLZ2J_RS05465 hinT 1053593..1054030 (-) 438 WP_003233231.1 HIT family protein -
  ACLZ2J_RS05470 pptA 1054518..1055261 (+) 744 WP_003233230.1 ABC transporter ATP-binding protein EcsA Regulator
  ACLZ2J_RS05475 ecsB 1055254..1056480 (+) 1227 WP_003245169.1 ABC transporter permease EcsB -
  ACLZ2J_RS05480 ecsC 1056500..1057210 (+) 711 WP_003233225.1 EcsC family protein -
  ACLZ2J_RS05485 sndC 1057228..1058418 (-) 1191 WP_003245681.1 N-acetyl amino acid acetylase SndC -
  ACLZ2J_RS05490 - 1058491..1059882 (-) 1392 WP_003233218.1 hypothetical protein -

Sequence

Protein


Download         Length: 247 a.a.        Molecular weight: 27722.20 Da        Isoelectric Point: 5.9114

>NTDB_id=972094 ACLZ2J_RS05470 WP_003233230.1 1054518..1055261(+) (pptA) [Bacillus subtilis strain BS18-1]
MSLLSVKDLTGGYTRNPVLKNVSFTLEPNQIVGLIGLNGAGKSTTIRHIIGLMDPHKGSIELNGKTFAEDPEGYRSQFTY
IPETPVLYEELTLMEHLELTAMAYGLSKETMEKRLPPLLKEFRMEKRLKWFPAHFSKGMKQKVMIMCAFLAEPALYIIDE
PFLGLDPLAINALLERMNEAKKGGASVLMSTHILATAERYCDSFIILHNGEVRARGTLSELREQFGMKDAALDDLYLELT
KEDAGHE

Nucleotide


Download         Length: 744 bp        

>NTDB_id=972094 ACLZ2J_RS05470 WP_003233230.1 1054518..1055261(+) (pptA) [Bacillus subtilis strain BS18-1]
ATGTCTCTGCTATCGGTAAAAGACTTGACCGGCGGATATACAAGGAATCCGGTTTTAAAAAACGTATCATTCACCCTTGA
ACCGAATCAAATTGTCGGCTTAATCGGGCTGAATGGTGCTGGTAAAAGTACAACAATCAGACACATCATCGGGCTGATGG
ACCCGCATAAAGGTTCAATCGAATTAAACGGTAAAACGTTTGCTGAGGATCCGGAAGGCTACCGTTCACAATTTACCTAT
ATACCTGAAACACCTGTTTTATACGAAGAATTGACGCTGATGGAGCATCTTGAACTAACAGCCATGGCATATGGACTGTC
AAAAGAAACGATGGAGAAAAGGCTGCCTCCGCTACTAAAGGAATTCCGAATGGAAAAGAGGCTGAAGTGGTTCCCGGCCC
ATTTTTCTAAAGGAATGAAGCAGAAGGTTATGATTATGTGCGCATTTTTGGCAGAGCCTGCGCTCTACATTATTGATGAG
CCTTTTCTAGGGCTTGATCCGCTTGCCATTAACGCGCTGCTTGAACGGATGAATGAAGCGAAAAAAGGCGGGGCGAGCGT
GCTGATGTCAACACACATTTTGGCAACGGCAGAACGCTATTGCGATTCGTTTATTATTTTACATAACGGCGAGGTGCGGG
CGCGCGGCACGCTGTCAGAGCTCAGAGAGCAGTTTGGAATGAAGGACGCGGCGCTGGACGATTTGTATCTTGAGCTTACA
AAGGAAGACGCTGGCCATGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-162)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NRP4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

56.904

96.761

0.551
  pptA Streptococcus thermophilus LMD-9

56.485

96.761

0.547

Multiple sequence alignment