Detailed information NTG0972067

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ACLZ2J_RS01670
• Genome accession: NZ_CP178514
• Coordinates: 303972..305093 (+)
• Length: 373 a.a.
• NCBI ID: WP_413155091.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain BS18-1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 298972..310093

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLZ2J_RS01645	ycdA	298980..300044 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
ACLZ2J_RS01650	-	300067..300198 (-)	132	WP_003246334.1	hypothetical protein	-
ACLZ2J_RS01655	ycdB	300372..301790 (+)	1419	WP_003246352.1	YcdB/YcdC domain-containing protein	-
ACLZ2J_RS01660	ycdC	301977..303338 (+)	1362	WP_010886397.1	YcdB/YcdC domain-containing protein	-
ACLZ2J_RS01665	cwlK	303346..303849 (-)	504	WP_009966473.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
ACLZ2J_RS01670	rapF	303972..305093 (+)	1122	WP_413155091.1	response regulator aspartate phosphatase RapJ	Regulator
ACLZ2J_RS01675	ycdF	305200..305976 (+)	777	WP_003246415.1	SDR family oxidoreductase	-
ACLZ2J_RS01680	ycdG	306001..307686 (+)	1686	WP_003234736.1	glycoside hydrolase family 13 protein	-
ACLZ2J_RS01685	znuA	307874..308833 (+)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
ACLZ2J_RS01690	znuC	308889..309584 (+)	696	WP_003234730.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44448.33 Da
• Isoelectric Point: 4.8371

>NTDB_id=972067 ACLZ2J_RS01670 WP_413155091.1 303972..305093(+) (rapF) [Bacillus subtilis strain BS18-1]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMFDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALEHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=972067 ACLZ2J_RS01670 WP_413155091.1 303972..305093(+) (rapF) [Bacillus subtilis strain BS18-1]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATATGATTTAGAAGATATGGAAGAGAATCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGTTTGATAAGCTGATGCCGGTGAAAGACAGCGATACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTACTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATTGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGAACATGCCAGGCAGCTTG
AAGAAGCGTACATGATCGCTGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCTTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCTGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGTT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (196-252)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.12	98.66	0.416
rapC	Bacillus subtilis subsp. subtilis str. 168	40.984	98.123	0.402