Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACL001_RS05500 Genome accession   NZ_CP178418
Coordinates   1167802..1168743 (+) Length   313 a.a.
NCBI ID   WP_001159457.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain L4796hy     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1162802..1173743
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACL001_RS05485 (ACL001_05485) basA 1163226..1165073 (+) 1848 WP_000910242.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -
  ACL001_RS05490 (ACL001_05490) basB 1165144..1167171 (-) 2028 WP_000939832.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  ACL001_RS05495 (ACL001_05495) - 1167671..1167802 (+) 132 WP_261483495.1 hypothetical protein -
  ACL001_RS05500 (ACL001_05500) ceuB 1167802..1168743 (+) 942 WP_001159457.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  ACL001_RS05505 (ACL001_05505) bauC 1168743..1169690 (+) 948 WP_001223282.1 ferric acinetobactin ABC transporter permease subunit BauC -
  ACL001_RS05510 (ACL001_05510) bauE 1169687..1170457 (+) 771 WP_000582117.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  ACL001_RS05515 (ACL001_05515) bauB 1170464..1171432 (+) 969 WP_001104132.1 siderophore-binding periplasmic lipoprotein BauB -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 33979.03 Da        Isoelectric Point: 8.4665

>NTDB_id=972008 ACL001_RS05500 WP_001159457.1 1167802..1168743(+) (ceuB) [Acinetobacter baumannii strain L4796hy]
MQFGLFCIFIILCICSLLLGAEQIQWSTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLICDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=972008 ACL001_RS05500 WP_001159457.1 1167802..1168743(+) (ceuB) [Acinetobacter baumannii strain L4796hy]
ATGCAATTCGGCTTATTCTGTATTTTTATCATTTTATGTATTTGCTCATTATTGCTCGGGGCTGAACAAATACAGTGGTC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGCCGTATTCCTCGTTTAATTACTATTGTGCTTA
CCGGTATCGGGTTGGCGGTATGTGGCGTCATCTTGCAGCATATTGTGCGTAACAAGTTTGTTGAACCGGAAACTTCGGGT
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCGTTAACTTTAGTTCCGGTAACCAGCACGCTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATTCGCCGGATCCGTTTTAGAAATACGGTTTTAG
TACCGGTTATTGGCTTGATGTACGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGCCACTATGAAGTTATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTCGCACACCGCTTTACCGTAATTGGTATGGGGGAAGAGATGGCTTCTAGTTTGGGACTCA
GTTATGCAGCTATAGCCGCCATTGGTTTGATACTGGTTGCCATTACAGTTTCGACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTAGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCGATTGTGGC
TTTGGGTGGGGCATCTCTATTACTGATTTGTGACATTCTTGGCCGCTCAATCATTTACCCATTTGAAGTGCCGATCGGAC
TTACCGCAGGGGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.257

94.569

0.419