Detailed information NTG0971793

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACL09D_RS11940
• Genome accession: NZ_CP178401
• Coordinates: 2444987..2446012 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain N1286
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2439987..2451012

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACL09D_RS11910 (ACL09D_11910)	zapB	2440071..2440316 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ACL09D_RS11915 (ACL09D_11915)	rraA	2440401..2440886 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACL09D_RS11920 (ACL09D_11920)	menA	2440979..2441905 (-)	927	WP_001307494.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACL09D_RS11925 (ACL09D_11925)	hslU	2441972..2443303 (-)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
ACL09D_RS11930 (ACL09D_11930)	hslV	2443313..2443843 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACL09D_RS11935 (ACL09D_11935)	ftsN	2443936..2444895 (-)	960	WP_000068834.1	cell division protein FtsN	-
ACL09D_RS11940 (ACL09D_11940)	cytR	2444987..2446012 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACL09D_RS11945 (ACL09D_11945)	priA	2446168..2448366 (-)	2199	WP_001315935.1	primosomal protein N'	Machinery gene
ACL09D_RS11950 (ACL09D_11950)	rpmE	2448569..2448781 (+)	213	WP_000710769.1	50S ribosomal protein L31	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=971793 ACL09D_RS11940 WP_000644904.1 2444987..2446012(-) (cytR) [Escherichia coli strain N1286]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=971793 ACL09D_RS11940 WP_000644904.1 2444987..2446012(-) (cytR) [Escherichia coli strain N1286]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGCTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCACTGTGTCACTATCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628