Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   ACK1X7_RS24135 Genome accession   NZ_CP178393
Coordinates   5623552..5625294 (-) Length   580 a.a.
NCBI ID   WP_385139410.1    Uniprot ID   -
Organism   Streptomyces sp. CY1     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 5618552..5630294
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK1X7_RS24120 (ACK1X7_24070) - 5619394..5620206 (-) 813 WP_385139419.1 response regulator transcription factor -
  ACK1X7_RS24125 (ACK1X7_24075) - 5620512..5621438 (+) 927 WP_390795048.1 alpha/beta hydrolase -
  ACK1X7_RS24130 (ACK1X7_24080) rcrQ 5621478..5623436 (-) 1959 WP_413115621.1 ABC transporter ATP-binding protein Regulator
  ACK1X7_RS24135 (ACK1X7_24085) rcrP 5623552..5625294 (-) 1743 WP_385139410.1 ABC transporter ATP-binding protein Regulator
  ACK1X7_RS24140 (ACK1X7_24090) - 5625416..5625691 (+) 276 WP_014053934.1 MoaD/ThiS family protein -
  ACK1X7_RS24145 (ACK1X7_24095) - 5625703..5627112 (+) 1410 WP_413115622.1 hypothetical protein -
  ACK1X7_RS24150 (ACK1X7_24100) - 5627196..5627882 (+) 687 WP_078642750.1 DUF2993 domain-containing protein -
  ACK1X7_RS24155 (ACK1X7_24105) - 5628094..5628174 (+) 81 WP_351229977.1 Ms5788A family Cys-rich leader peptide -
  ACK1X7_RS24160 (ACK1X7_24110) - 5628329..5629168 (+) 840 WP_385139404.1 sulfurtransferase -
  ACK1X7_RS24165 (ACK1X7_24115) - 5629213..5629500 (+) 288 WP_028814639.1 DUF1416 domain-containing protein -
  ACK1X7_RS24170 (ACK1X7_24120) - 5629660..5629917 (+) 258 WP_030837960.1 DUF3099 domain-containing protein -

Sequence

Protein


Download         Length: 580 a.a.        Molecular weight: 62726.94 Da        Isoelectric Point: 6.4039

>NTDB_id=971689 ACK1X7_RS24135 WP_385139410.1 5623552..5625294(-) (rcrP) [Streptomyces sp. CY1]
MLVRLIRAYLRPYTRTITLIVLLQLVQTLATLYLPALNADIIDGGVVKGDTGYIVHVGGLMIAVTFVQIVCAAGAVYFSA
RTAMALGRDVRAAVFDRVQSFSAREMGHFGAPSLITRTTNDVQQVQMLCLMSFTLMVSAPIMCVGGVVMALNQDVPLSGL
LLLIVPALGVVVTLIVRRMRPLFRHVQDRIDTVNRVLREQITGIRVIRAFVRDTHERDRFTTANTGLMDVSLRAGRLMSL
MFPSVMLVVNVSSVAVVWFGGHRIDSGGMQIGALTAFLSYLAQILSSVMMATFMFMMVPRAEVCAERVQEVLDTETSVVP
PLVPVTAAPADAGRGLLELRGVEFRFPGADEPVLRDISLIARPGRTTAVIGSTGSGKSTLLGLVPRLFDATDGSVHLDGV
DVRDLDPEVMTRNIGLVPQKPYLFAGTVASNLRYGNPDATDEELWRALETAQAREFVESMEAGLDAPIAQGGTNVSGGQR
QRLAIARALVRRPSVYLFDDSFSALDYATDARLRAALVDETENATVVIVAQRVSTIRGADLIVVLDAGRIVGAGTHGELM
AGNETYREIVLSQLTEQEAA

Nucleotide


Download         Length: 1743 bp        

>NTDB_id=971689 ACK1X7_RS24135 WP_385139410.1 5623552..5625294(-) (rcrP) [Streptomyces sp. CY1]
GTGCTGGTACGACTGATACGGGCGTATCTGAGGCCCTATACCCGAACGATCACACTGATCGTTTTATTGCAACTGGTGCA
GACCCTCGCCACCCTCTACCTCCCCGCGCTGAACGCGGACATCATCGACGGCGGAGTGGTGAAGGGTGACACCGGCTACA
TCGTCCATGTCGGCGGGCTGATGATCGCCGTCACCTTTGTCCAGATCGTGTGCGCCGCGGGAGCCGTCTACTTCAGCGCC
CGTACGGCCATGGCGCTCGGCCGCGATGTGCGCGCCGCCGTCTTCGACCGGGTGCAGTCCTTCTCGGCCCGTGAGATGGG
CCACTTCGGGGCGCCGTCCCTGATCACCCGCACCACCAACGATGTGCAGCAGGTGCAGATGCTGTGCCTGATGTCGTTCA
CGCTGATGGTCTCGGCGCCGATCATGTGCGTCGGCGGTGTGGTCATGGCGCTCAACCAGGACGTTCCGCTGTCGGGGCTG
CTCCTGCTCATCGTTCCGGCCCTGGGCGTGGTCGTCACGCTCATCGTCCGCCGGATGCGGCCGCTGTTCCGCCATGTCCA
GGACCGCATCGACACCGTCAACCGGGTGCTGCGCGAGCAGATCACCGGTATCCGGGTCATCCGCGCCTTCGTCCGCGACA
CCCATGAGCGCGACCGCTTCACCACCGCCAACACCGGGCTGATGGACGTCTCGCTGCGGGCCGGGCGGCTGATGTCGCTG
ATGTTCCCCTCCGTGATGCTGGTGGTGAACGTCTCCAGCGTGGCCGTCGTCTGGTTCGGCGGGCACCGGATCGACAGCGG
CGGGATGCAGATCGGCGCGCTGACCGCGTTCCTCAGCTATCTGGCGCAGATTCTGTCGTCCGTGATGATGGCCACCTTCA
TGTTCATGATGGTGCCGAGGGCCGAGGTGTGCGCCGAGCGCGTACAGGAGGTGCTGGACACCGAGACCAGTGTCGTACCG
CCCCTCGTGCCCGTCACCGCCGCGCCCGCCGACGCCGGACGAGGGCTGCTGGAGCTGCGGGGCGTGGAGTTCCGCTTCCC
CGGCGCCGACGAGCCGGTGCTGCGCGACATCTCGCTGATCGCCCGGCCCGGCCGGACCACCGCCGTCATCGGCTCCACCG
GCAGCGGCAAGTCGACCCTGCTCGGGTTGGTGCCGCGGCTGTTCGACGCGACCGACGGCAGCGTCCACCTCGACGGGGTG
GATGTGCGCGACCTCGATCCGGAGGTGATGACCCGGAACATCGGGCTCGTCCCGCAGAAGCCGTATCTCTTCGCCGGCAC
CGTCGCCTCCAACCTGCGGTACGGCAATCCTGACGCCACCGACGAGGAGCTGTGGCGGGCCCTGGAGACCGCCCAGGCAC
GGGAGTTCGTGGAGTCCATGGAGGCCGGGCTCGACGCCCCGATCGCCCAGGGCGGGACCAATGTGTCCGGCGGCCAGCGG
CAGCGGCTGGCGATCGCCCGGGCCCTGGTCCGCAGGCCGTCCGTCTACCTCTTCGACGACTCCTTCTCCGCGCTCGACTA
CGCCACCGACGCCCGGCTGAGGGCGGCGCTCGTGGACGAGACGGAGAACGCGACGGTCGTCATCGTCGCCCAGCGGGTGT
CCACGATCCGGGGCGCCGATCTGATCGTGGTGCTCGACGCGGGGCGGATCGTCGGCGCCGGTACCCACGGCGAGCTGATG
GCCGGCAACGAGACCTACCGCGAGATCGTGCTCTCTCAGCTCACGGAACAGGAAGCCGCATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(354-501)

ABC transporter transmembrane region (ABC_membrane)

(18-287)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

38.768

95.172

0.369

Multiple sequence alignment