Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | WOC52_RS12470 | Genome accession | NZ_CP150739 |
| Coordinates | 2498792..2499091 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain TUM22721 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2493792..2504091
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WOC52_RS12445 (WOC52_12435) | gcvPA | 2495004..2496350 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| WOC52_RS12450 (WOC52_12440) | gcvT | 2496370..2497461 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| WOC52_RS12455 (WOC52_12445) | - | 2497620..2498144 (-) | 525 | WP_001015117.1 | shikimate kinase | - |
| WOC52_RS12460 (WOC52_12450) | - | 2498134..2498280 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| WOC52_RS12465 (WOC52_12455) | comGF | 2498377..2498874 (-) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| WOC52_RS12470 (WOC52_12460) | comGE | 2498792..2499091 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| WOC52_RS12475 (WOC52_12465) | comGD | 2499078..2499524 (-) | 447 | WP_001790850.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| WOC52_RS12480 (WOC52_12470) | comGC | 2499502..2499813 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| WOC52_RS12485 (WOC52_12475) | comGB | 2499827..2500897 (-) | 1071 | WP_000775708.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| WOC52_RS12490 (WOC52_12480) | comGA | 2500869..2501843 (-) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| WOC52_RS12495 (WOC52_12485) | - | 2501895..2502518 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| WOC52_RS12500 (WOC52_12490) | - | 2502515..2502844 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| WOC52_RS12505 (WOC52_12495) | - | 2502844..2503830 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| WOC52_RS12510 (WOC52_12500) | - | 2503827..2504030 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=971532 WOC52_RS12470 WP_000844413.1 2498792..2499091(-) (comGE) [Staphylococcus aureus strain TUM22721]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=971532 WOC52_RS12470 WP_000844413.1 2498792..2499091(-) (comGE) [Staphylococcus aureus strain TUM22721]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |