Detailed information NTG0097153

Bioinformatically predicted

Overview

• Name: pilH
• Type: Machinery gene
• Locus tag: AACJ92_RS15310
• Genome accession: NZ_AP029006
• Coordinates: 3249620..3249988 (-)
• Length: 122 a.a.
• NCBI ID: WP_003269243.1
• Uniprot ID: Q8Y1M1
• Organism: Ralstonia pseudosolanacearum strain MAFF 211520
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3244620..3254988

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AACJ92_RS15300 (MAFF211520_30000)	-	3246539..3248770 (-)	2232	WP_011000626.1	methyl-accepting chemotaxis protein	-
AACJ92_RS15305 (MAFF211520_30010)	-	3249016..3249561 (-)	546	WP_011000625.1	chemotaxis protein CheW	-
AACJ92_RS15310 (MAFF211520_30020)	pilH	3249620..3249988 (-)	369	WP_003269243.1	response regulator	Machinery gene
AACJ92_RS15315 (MAFF211520_30030)	pilG	3250020..3250487 (-)	468	WP_016723446.1	response regulator	Regulator
AACJ92_RS15320 (MAFF211520_30040)	-	3250778..3250960 (-)	183	WP_003261842.1	rubredoxin	-
AACJ92_RS15325 (MAFF211520_30050)	hemL	3251172..3252473 (+)	1302	WP_111374466.1	glutamate-1-semialdehyde 2,1-aminomutase	-
AACJ92_RS15330 (MAFF211520_30060)	dapA	3252576..3253490 (-)	915	WP_020831380.1	4-hydroxy-tetrahydrodipicolinate synthase	-
AACJ92_RS15335 (MAFF211520_30070)	-	3253871..3254497 (+)	627	WP_016723449.1	LemA family protein	-

Sequence

Protein

• Length: 122 a.a.
• Molecular weight: 13482.73 Da
• Isoelectric Point: 4.9328

>NTDB_id=97153 AACJ92_RS15310 WP_003269243.1 3249620..3249988(-) (pilH) [Ralstonia pseudosolanacearum strain MAFF 211520]
MAIKKILVVDDSPTEALFLSEILSKNGFKVSVAADSDQAMAKLEGEPFDLVLMDVVMPGQNGYQATRAIKKDDRFKDIPV
IICTTKGLETDRVWGMRQGASDYIVKPVKAEELLEKIAKLPQ

Nucleotide

• Length: 369 bp

>NTDB_id=97153 AACJ92_RS15310 WP_003269243.1 3249620..3249988(-) (pilH) [Ralstonia pseudosolanacearum strain MAFF 211520]
ATGGCAATCAAAAAGATTCTGGTGGTTGATGACTCCCCCACCGAAGCACTGTTCCTGTCGGAAATCCTGAGCAAGAACGG
TTTCAAGGTGTCGGTCGCGGCCGACAGCGACCAGGCCATGGCCAAGCTGGAAGGCGAGCCTTTCGACCTGGTCCTGATGG
ACGTGGTGATGCCCGGCCAGAACGGCTACCAGGCCACCCGCGCGATCAAGAAGGACGATCGCTTCAAGGACATCCCGGTG
ATCATCTGCACCACCAAGGGCCTGGAGACCGACCGCGTGTGGGGCATGCGCCAGGGCGCGTCGGACTACATCGTCAAGCC
GGTCAAGGCAGAAGAGCTGCTCGAAAAGATCGCCAAGCTGCCGCAGTAA

Domains

Predicted by InterProScan.

• Response regulator receiver domain (Response_reg) (6-117)

3D structure

• AlphaFold DB: Q8Y1M1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilH	Synechocystis sp. PCC 6803	44.915	96.721	0.434