Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACLUR8_RS05115 Genome accession   NZ_CP178253
Coordinates   1110331..1111272 (+) Length   313 a.a.
NCBI ID   WP_206677396.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain A118     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1105331..1116272
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLUR8_RS05100 (ACLUR8_05100) basA 1105751..1107598 (+) 1848 WP_168726512.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -
  ACLUR8_RS05105 (ACLUR8_05105) basB 1107669..1109699 (-) 2031 WP_168726630.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  ACLUR8_RS05110 (ACLUR8_05110) - 1110200..1110331 (+) 132 WP_001218004.1 hypothetical protein -
  ACLUR8_RS05115 (ACLUR8_05115) ceuB 1110331..1111272 (+) 942 WP_206677396.1 ABC transporter permease Machinery gene
  ACLUR8_RS05120 (ACLUR8_05120) bauC 1111272..1112219 (+) 948 WP_168726513.1 ferric acinetobactin ABC transporter permease subunit BauC -
  ACLUR8_RS05125 (ACLUR8_05125) bauE 1112216..1112986 (+) 771 WP_114154606.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  ACLUR8_RS05130 (ACLUR8_05130) bauB 1112993..1113961 (+) 969 WP_001104132.1 siderophore-binding periplasmic lipoprotein BauB -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 33925.98 Da        Isoelectric Point: 8.1466

>NTDB_id=971250 ACLUR8_RS05115 WP_206677396.1 1110331..1111272(+) (ceuB) [Acinetobacter baumannii strain A118]
MQFGLFCIFIILCICSLLLGAEQIQWSTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHCFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLICDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=971250 ACLUR8_RS05115 WP_206677396.1 1110331..1111272(+) (ceuB) [Acinetobacter baumannii strain A118]
ATGCAATTCGGCTTATTCTGTATTTTTATCATTTTATGTATTTGCTCGTTATTGCTCGGGGCTGAGCAAATACAGTGGTC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGCCGTATTCCTCGTTTGATTACCATTGTACTCA
CCGGTATCGGGTTGGCGGTATGTGGCGTCATCTTGCAGCATATTGTGCGTAACAAGTTTGTTGAACCGGAAACTTCGGGT
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCGTTAACTTTAGTTCCGGTAACCAGCACGCTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATCCGCCGGATCCGTTTTAGAAATACGGTTTTAG
TACCGGTAATTGGTTTGATGTACGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGCCACTATGAAGTTATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTTGCACACTGCTTTACTGTGATTGGTATGGGGGAAGAGATGGCTTCTAGCTTAGGACTCA
GTTATGCGGCTATAGCCGCCATTGGTTTGATACTGGTTGCTATTACAGTTTCGACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTAGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCGATTGTGGC
TTTAGGTGGGGCGTCTCTATTACTGATTTGCGACATTCTTGGTCGTTCAATTATTTATCCATTTGAAGTGCCAATCGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.257

94.569

0.419

Multiple sequence alignment